RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SMIM9A6NGZ8 99 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 ZNF705FA8MVS1 300 aaPredicted RBP8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 ISLRO14498 428 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 SFT2D2O95562 160 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 ZNF705DP0CH99 300 aaPredicted RBP8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 ZNF705BP0CI00 300 aaPredicted RBP8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 S100A5P33763 92 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 MEOX2P50222 304 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 OR2F1Q13607 317 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 C12orf74Q32Q52 190 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 OR8I2Q8N0Y5 310 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 THAP8Q8NA92 274 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 LINC00052Q96N35 136 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 SLC45A2Q9UMX9 530 aa8.31□□□□□ -1.08
SQSTM1-203ENST00000422245 SYNGR2O43760 224 aa8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 S100A7P31151 101 aa8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 GALR1P47211 349 aa8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 PAX9P55771 341 aa8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 UBE2MP61081 183 aaKnown RBP8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 PPP1R1AQ13522 171 aa8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 ZNF79Q15937 498 aa8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 GDF5OSQ5U4N7 250 aa8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 GGNBP1Q5YKI7 109 aa8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 RFNGQ9Y644 331 aa8.3□□□□□ -1.08
SQSTM1-203ENST00000422245 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 IGKV1OR2-108A0A075B7D4 117 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 PRSS46E5RG02 174 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 IGKV3-20P01619 116 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 SPART-AS1P0CW21 52 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 EBLN2Q6P2I7 272 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 ZNF767PQ75MW2 155 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 ZNF709Q8N972 641 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 OR4B1Q8NGF8 309 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 NDUFAF3Q9BU61 184 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 MAGT1Q9H0U3 335 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 GOLT1BQ9Y3E0 138 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 HERC2O95714 4834 aa8.29□□□□□ -1.08
SQSTM1-203ENST00000422245 IGHV3OR16-12A0A075B7B8 117 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 P0DMU3 169 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 FAM231AP0DMU4 169 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 FAM231CP0DMU5 169 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 DEFB1P60022 68 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 PSG9Q00887 426 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 AKR1C1Q04828 323 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 ACOT7LQ6ZUV0 252 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 CCDC190Q86UF4 302 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 BPIFCQ8NFQ6 507 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 GPR82Q96P67 336 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 SLC25A32Q9H2D1 315 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 RPRMQ9NS64 109 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 STRAPQ9Y3F4 350 aaKnown RBP8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 HECTD4Q9Y4D8 3996 aa8.28□□□□□ -1.08
SQSTM1-203ENST00000422245 A0A0J9YX75 114 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 CCDC160A6NGH7 325 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 ZNF98A6NK75 572 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 WRBO00258 174 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 HOXB5P09067 269 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 EMP1P54849 157 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 FXYD7P58549 80 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 SPANXN5Q5MJ07 72 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 SPANXN2Q5MJ10 180 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 FAM78BQ5VT40 261 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 LINC00336Q6ZUF6 198 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 POM121L12Q8N7R1 296 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 OR4D5Q8NGN0 318 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 OR1B1Q8NGR6 318 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 FAM210BQ96KR6 192 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 C16orf92Q96LL3 132 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 TMEM147Q9BVK8 224 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 SLC35B3Q9H1N7 401 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 SLC25A22Q9H936 323 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 DOK5Q9P104 306 aa8.27□□□□□ -1.09
SQSTM1-203ENST00000422245 A8MTW9 85 aa8.26□□□□□ -1.09
SQSTM1-203ENST00000422245 F6UB75 175 aa8.26□□□□□ -1.09
SQSTM1-203ENST00000422245 H3BP45 60 aa8.26□□□□□ -1.09
SQSTM1-203ENST00000422245 HBE1P02100 147 aa8.26□□□□□ -1.09
SQSTM1-203ENST00000422245 C7orf50Q9BRJ6 194 aaKnown RBP8.26□□□□□ -1.09
SQSTM1-203ENST00000422245 RSG1Q9BU20 258 aa8.26□□□□□ -1.09
SQSTM1-203ENST00000422245 DKK2Q9UBU2 259 aa8.26□□□□□ -1.09
SQSTM1-203ENST00000422245 NAP1L6A6NFF2 107 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 NDUFB6O95139 128 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 ORM2P19652 201 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 INPP1P49441 399 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 OXA1LQ15070 435 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 RRN3P1Q2M238 152 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 FAM222AQ5U5X8 452 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 TRIQKQ629K1 86 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 TMEM144Q7Z5S9 345 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 C20orf173Q96LM9 149 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 NIPSNAP3BQ9BS92 247 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 SCRT1Q9BWW7 348 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 SRRQ9GZT4 340 aa8.25□□□□□ -1.09
SQSTM1-203ENST00000422245 LOC102723971A0A1B0GUV8 181 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 C9orf170A2RU37 121 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 SMCO3A2RU48 225 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 H3BRN7 92 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 ZNF701M0R085 212 aaPredicted RBP8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 ADAP1O75689 374 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 DUSP14O95147 198 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms