RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 NMSQ5H8A3 153 aa5.72□□□□□ -1.49
VIM-202ENST00000421459 IGFL4Q6B9Z1 124 aa5.72□□□□□ -1.49
VIM-202ENST00000421459 STEAP1BQ6NZ63 245 aa5.72□□□□□ -1.49
VIM-202ENST00000421459 FOXI2Q6ZQN5 318 aa5.72□□□□□ -1.49
VIM-202ENST00000421459 TMEM229BQ8NBD8 167 aa5.72□□□□□ -1.49
VIM-202ENST00000421459 C15orf40Q8WUR7 153 aa5.72□□□□□ -1.49
VIM-202ENST00000421459 RBPMSQ93062 196 aaKnown RBP5.72□□□□□ -1.49
VIM-202ENST00000421459 RBKSQ9H477 322 aa5.72□□□□□ -1.49
VIM-202ENST00000421459 A0A0J9YX75 114 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 TMEM189A5PLL7 270 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 SMIM9A6NGZ8 99 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 CRYM-AS1A6NIL9 109 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 ZNF705GA8MUZ8 300 aaPredicted RBP5.71□□□□□ -1.5
VIM-202ENST00000421459 IL7P13232 177 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 TAS2R19P59542 299 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 LYZP61626 148 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 MRPS10P82664 201 aaKnown RBP5.71□□□□□ -1.5
VIM-202ENST00000421459 PSG9Q00887 426 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 KLF9Q13886 244 aaPredicted RBP5.71□□□□□ -1.5
VIM-202ENST00000421459 IL18Q14116 193 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 GAMTQ14353 236 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 BAK1Q16611 211 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 LYZL2Q7Z4W2 148 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 FAM219AQ8IW50 185 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 COQ8AQ8NI60 647 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 SMIM4Q8WVI0 70 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 TRIM63Q969Q1 353 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 C7orf50Q9BRJ6 194 aaKnown RBP5.71□□□□□ -1.5
VIM-202ENST00000421459 SEPSECSQ9HD40 501 aaKnown RBP5.71□□□□□ -1.5
VIM-202ENST00000421459 GPR132Q9UNW8 380 aa5.71□□□□□ -1.5
VIM-202ENST00000421459 C14orf166Q9Y224 244 aaKnown RBP5.71□□□□□ -1.5
VIM-202ENST00000421459 ZFP92A6NM28 416 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 C16orf90A8MZG2 172 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 GABARAPH6UMI1 98 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 HBE1P02100 147 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 SULT1A3P0DMM9 295 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 SULT1A4P0DMN0 295 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 AZU1P20160 251 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 TBPP20226 339 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 ID1P41134 155 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 PSMB3P49720 205 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 DAD1P61803 113 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 RNF212Q495C1 297 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 PYDC2Q56P42 97 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 ETFRF1Q6IPR1 90 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 AMTNQ6UX39 209 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 TMEM182Q6ZP80 229 aaPredicted RBP5.7□□□□□ -1.5
VIM-202ENST00000421459 MAPKAPK5-AS1Q8N8E1 139 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 OR4C16Q8NGL9 310 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 DTD1Q8TEA8 209 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 FAM210BQ96KR6 192 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 MAGT1Q9H0U3 335 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 GOLT1BQ9Y3E0 138 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 TMEM56-RWDD3S4R434 201 aa5.7□□□□□ -1.5
VIM-202ENST00000421459 IGKV1OR2-108A0A075B7D4 117 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 M0R2Z0 102 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 B3GALNT1O75752 331 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 NUDT3O95989 172 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 DEFB130BP0DP73 79 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 DEFB130AP0DP74 79 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 IAPPP10997 89 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 GATA2P23769 480 aaPredicted RBP5.69□□□□□ -1.5
VIM-202ENST00000421459 PAX9P55771 341 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 SUPT4H1P63272 117 aaKnown RBP5.69□□□□□ -1.5
VIM-202ENST00000421459 SSBP1Q04837 148 aaKnown RBP5.69□□□□□ -1.5
VIM-202ENST00000421459 ASAH1Q13510 395 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 OXA1LQ15070 435 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 SPINK13Q1W4C9 94 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 RRN3P1Q2M238 152 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 SOHLH1Q5JUK2 328 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 EBLN2Q6P2I7 272 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 LGI3Q8N145 548 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 OR51S1Q8NGJ8 323 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 DEDD2Q8WXF8 326 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 PPP1R14BQ96C90 147 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 C16orf92Q96LL3 132 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 RSG1Q9BU20 258 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 SLC25A32Q9H2D1 315 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 SLC25A22Q9H936 323 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 HSPB7Q9UBY9 170 aa5.69□□□□□ -1.5
VIM-202ENST00000421459 TRAV12-2A0A075B6T6 113 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 NBDYA0A0U1RRE5 68 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 DISC1C4P0D8 188 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 PLA2G10O15496 165 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 CRXO43186 299 aaPredicted RBP5.68□□□□□ -1.5
VIM-202ENST00000421459 AKR1C4P17516 323 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 SMCO1Q147U7 214 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 TRIQKQ629K1 86 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 OR8G2PQ6IF36 304 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 BAP18Q8IXM2 172 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 OR8I2Q8N0Y5 310 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 RNF182Q8N6D2 247 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 ZNRF2Q8NHG8 242 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 CLUHP3Q96NS8 147 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 ATG101Q9BSB4 218 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 TMEM208Q9BTX3 173 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 SLC25A39Q9BZJ4 359 aaPredicted RBP5.68□□□□□ -1.5
VIM-202ENST00000421459 DOK5Q9P104 306 aa5.68□□□□□ -1.5
VIM-202ENST00000421459 PAIP2BQ9ULR5 123 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms