RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ARL2-SNX15V9GYD0 113 aa10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 MAP1LC3B2A6NCE7 125 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 IGHV3-23P01764 117 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 HSPB1P04792 205 aaKnown RBP10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 C8orf88P0DMB2 117 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 PSMB3P49720 205 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 PPT1P50897 306 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 DEFA5Q01523 94 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 TOMM20LQ6UXN7 152 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 SFT2D1Q8WV19 159 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 MARC2Q969Z3 335 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 MAP1LC3BQ9GZQ8 125 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 PFDN2Q9UHV9 154 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 HIGD1AQ9Y241 93 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 RNF114Q9Y508 228 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 S4R3C0 116 aa10.97□□□□□ -0.65
SHMT1P1-201ENST00000419974 K7EMT4 169 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 CXorf1O96002 111 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 IL4P05112 153 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 ORM2P19652 201 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 USF2Q15853 346 aaPredicted RBP10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 KHDC3LQ587J8 217 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 C1orf194Q5T5A4 169 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 FAM122CQ6P4D5 195 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 SSX7Q7RTT5 188 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 LINC00305Q7Z4B0 112 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 FAM167A-AS1Q96KT0 104 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 SHANK2-AS3Q9BTD1 123 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 TMEM14CQ9P0S9 112 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 U3KQE9 123 aa10.96□□□□□ -0.65
SHMT1P1-201ENST00000419974 ANKRD34BA5PLL1 514 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 H3BRN7 92 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 LGALS9O00182 355 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 CRYBB3P26998 211 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 FOXL1Q12952 345 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 UQCC3Q6UW78 93 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 LCNL1Q6ZST4 164 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 OR1B1Q8NGR6 318 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 SCRT1Q9BWW7 348 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 SLC25A39Q9BZJ4 359 aaPredicted RBP10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 HRH4Q9H3N8 390 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 SLC25A22Q9H936 323 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 GNB4Q9HAV0 340 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 RABAC1Q9UI14 185 aa10.95□□□□□ -0.66
SHMT1P1-201ENST00000419974 TRBV12-3P01733 135 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 IGHV3-11P01762 117 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 ZP3P21754 424 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 LYZP61626 148 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 FAM106AQ4KMX7 169 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 MIR17HGQ75NE6 70 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 REC114Q7Z4M0 266 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 FAM210AQ96ND0 272 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 TXNDC17Q9BRA2 123 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 TMEM167BQ9NRX6 74 aa10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 TSSC4Q9Y5U2 329 aaPredicted RBP10.94□□□□□ -0.66
SHMT1P1-201ENST00000419974 ZNF98A6NK75 572 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 A8MWP6 167 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 PPP5D1E7EU14 171 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 LCN15Q6UWW0 184 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 PCNPQ8WW12 178 aaKnown RBP10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 ZNF503Q96F45 646 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 GPR82Q96P67 336 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 PBDC1Q9BVG4 233 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 SLC25A2Q9BXI2 301 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 MANBALQ9NQG1 85 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
SHMT1P1-201ENST00000419974 BUB3O43684 328 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 CD5P06127 495 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 GCHFRP30047 84 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 CCL20P78556 96 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 FHL3Q13643 280 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 KLF5Q13887 457 aaPredicted RBP10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 MORN5Q5VZ52 161 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 SPATA31B1PQ5VZV4 182 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 C12orf54Q6X4T0 127 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 UHRF2Q96PU4 802 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 METTL26Q96S19 204 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 DOK5Q9P104 306 aa10.92□□□□□ -0.66
SHMT1P1-201ENST00000419974 MRPS12O15235 138 aaKnown RBP10.91□□□□□ -0.66
SHMT1P1-201ENST00000419974 IFNA1P01562 189 aa10.91□□□□□ -0.66
SHMT1P1-201ENST00000419974 ARL14EPLP0DKL9 152 aa10.91□□□□□ -0.66
SHMT1P1-201ENST00000419974 NPPCP23582 126 aa10.91□□□□□ -0.66
SHMT1P1-201ENST00000419974 BPIFA4PQ86YQ2 179 aa10.91□□□□□ -0.66
SHMT1P1-201ENST00000419974 NKX6-2Q9C056 277 aaPredicted RBP10.91□□□□□ -0.66
SHMT1P1-201ENST00000419974 OR51M1Q9H341 326 aa10.91□□□□□ -0.66
SHMT1P1-201ENST00000419974 DAZ1Q9NQZ3 744 aaKnown RBP10.91□□□□□ -0.66
SHMT1P1-201ENST00000419974 UFC1Q9Y3C8 167 aa10.91□□□□□ -0.66
SHMT1P1-201ENST00000419974 A0A1W2PRE2 83 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 RBFOX3A6NFN3 312 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 LINC01619G3V211 115 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 CD28P10747 220 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 GP9P14770 177 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 RPL7P18124 248 aaKnown RBP10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 MEOX2P50222 304 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 GUK1Q16774 197 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 RPEL1Q2QD12 228 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 ZNF506Q5JVG8 444 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 UNQ9165/PRO28630Q6UXU0 137 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 COMMD7Q86VX2 200 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms