RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SSMEM1Q8WWF3 244 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 RASL11BQ9BPW5 248 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 PSENENQ9NZ42 101 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 ZFP30Q9Y2G7 519 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 REG1AP05451 166 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 BLCAPP62952 87 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 TMEM183BQ1AE95 376 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 COL5A1-AS1Q5SY13 56 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 PARD6GQ9BYG4 376 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-202ENST00000414700 PARLQ9H300 379 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 PLEKHA3Q9HB20 300 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 HEYLQ9NQ87 328 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-202ENST00000414700 VPREB3Q9UKI3 123 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 IGLC7A0M8Q6 106 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 TEX22C9J3V5 150 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 HLA-DRB1P01911 266 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 AREGP15514 252 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 PSMB3P49720 205 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 OR5I1Q13606 314 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 SAPCD1Q5SSQ6 148 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 TOMM20LQ6UXN7 152 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 ZNF562Q6V9R5 426 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 OR4C12Q96R67 309 aa12.25□□□□□ -0.45
SHMT2-202ENST00000414700 SETD2Q9BYW2 2564 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-202ENST00000414700 SRD5A1P18405 259 aa12.24□□□□□ -0.45
SHMT2-202ENST00000414700 TMEM256Q8N2U0 113 aa12.24□□□□□ -0.45
SHMT2-202ENST00000414700 SLC39A9Q9NUM3 307 aa12.24□□□□□ -0.45
SHMT2-202ENST00000414700 TRAPPC1Q9Y5R8 145 aa12.24□□□□□ -0.45
SHMT2-202ENST00000414700 TCF21O43680 179 aa12.23□□□□□ -0.45
SHMT2-202ENST00000414700 EGR2P11161 476 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-202ENST00000414700 CMTM2Q8TAZ6 248 aa12.23□□□□□ -0.45
SHMT2-202ENST00000414700 ESM1Q9NQ30 184 aa12.23□□□□□ -0.45
SHMT2-202ENST00000414700 MANBALQ9NQG1 85 aa12.23□□□□□ -0.45
SHMT2-202ENST00000414700 CDC42EP3Q9UKI2 254 aa12.23□□□□□ -0.45
SHMT2-202ENST00000414700 PXMP4Q9Y6I8 212 aa12.23□□□□□ -0.45
SHMT2-202ENST00000414700 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
SHMT2-202ENST00000414700 ARPC1AQ92747 370 aa12.23□□□□□ -0.45
SHMT2-202ENST00000414700 DNAJC4Q9NNZ3 241 aa12.23□□□□□ -0.45
SHMT2-202ENST00000414700 TPPP2P59282 170 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 PAFAH1B2P68402 229 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 HBG1P69891 147 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 HBG2P69892 147 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 ARL16Q0P5N6 197 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 BATFQ16520 125 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 ASPHD1Q5U4P2 390 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 HAPLN4Q86UW8 402 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 TAF15Q92804 592 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHMT2-202ENST00000414700 CIB3Q96Q77 187 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-202ENST00000414700 VAMP8Q9BV40 100 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 WDR61Q9GZS3 305 aaKnown RBP12.22□□□□□ -0.45
SHMT2-202ENST00000414700 ENY2Q9NPA8 101 aa12.22□□□□□ -0.45
SHMT2-202ENST00000414700 ATP6V0E1O15342 81 aa12.21□□□□□ -0.45
SHMT2-202ENST00000414700 NUPR1O60356 82 aa12.21□□□□□ -0.45
SHMT2-202ENST00000414700 FAM78BQ5VT40 261 aa12.21□□□□□ -0.45
SHMT2-202ENST00000414700 CST9LP1Q5W188 147 aa12.21□□□□□ -0.45
SHMT2-202ENST00000414700 TMEM14EPQ6UXP3 125 aa12.21□□□□□ -0.45
SHMT2-202ENST00000414700 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.45
SHMT2-202ENST00000414700 SLC24A4Q8NFF2 622 aa12.21□□□□□ -0.45
SHMT2-202ENST00000414700 AURKAIP1Q9NWT8 199 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-202ENST00000414700 LINC00527Q9UJ94 153 aa12.21□□□□□ -0.45
SHMT2-202ENST00000414700 TIMM9Q9Y5J7 89 aa12.21□□□□□ -0.45
SHMT2-202ENST00000414700 A0A1B0GUS0 222 aa12.21□□□□□ -0.46
SHMT2-202ENST00000414700 DNAJC9-AS1A6NH13 148 aa12.21□□□□□ -0.46
SHMT2-202ENST00000414700 Q6ZWC4 215 aa12.21□□□□□ -0.46
SHMT2-202ENST00000414700 OR4F5Q8NH21 305 aa12.21□□□□□ -0.46
SHMT2-202ENST00000414700 OR4F4Q96R69 305 aa12.21□□□□□ -0.46
SHMT2-202ENST00000414700 A0A1W2PN81 502 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 ZNF320A2RRD8 509 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 PMS2P5A8MQ11 134 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 RNASE2P10153 161 aaKnown RBP12.2□□□□□ -0.46
SHMT2-202ENST00000414700 CHRNA7P36544 502 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 JMJD1CQ15652 2540 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 OR8G2PQ6IF36 304 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 INS-IGF2F8WCM5 200 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 G3V318 75 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 NPY1RP25929 384 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 MFAP2P55001 183 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 RBX1P62877 108 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 TMEM95Q3KNT9 176 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 RPP25LQ8N5L8 163 aaKnown RBP12.2□□□□□ -0.46
SHMT2-202ENST00000414700 PAM16Q9Y3D7 125 aa12.2□□□□□ -0.46
SHMT2-202ENST00000414700 CTXND1A0A1B0GTU2 59 aa12.19□□□□□ -0.46
SHMT2-202ENST00000414700 ESDP10768 282 aa12.19□□□□□ -0.46
SHMT2-202ENST00000414700 SELENOTP62341 195 aa12.19□□□□□ -0.46
SHMT2-202ENST00000414700 ERHP84090 104 aaKnown RBP12.19□□□□□ -0.46
SHMT2-202ENST00000414700 ECSCRQ19T08 205 aa12.19□□□□□ -0.46
SHMT2-202ENST00000414700 SLC35E1Q96K37 410 aa12.19□□□□□ -0.46
SHMT2-202ENST00000414700 IGHG2P01859 326 aa12.18□□□□□ -0.46
SHMT2-202ENST00000414700 TFPI2P48307 235 aa12.18□□□□□ -0.46
SHMT2-202ENST00000414700 TDRG1Q3Y452 100 aa12.18□□□□□ -0.46
SHMT2-202ENST00000414700 SGMS2Q8NHU3 365 aa12.18□□□□□ -0.46
SHMT2-202ENST00000414700 ADMP35318 185 aa12.18□□□□□ -0.46
SHMT2-202ENST00000414700 FOXL1Q12952 345 aa12.18□□□□□ -0.46
SHMT2-202ENST00000414700 OR5T1Q8NG75 326 aa12.18□□□□□ -0.46
SHMT2-202ENST00000414700 UBE2L5PA0A1B0GUS4 154 aa12.17□□□□□ -0.46
SHMT2-202ENST00000414700 C20orf202A1L168 122 aa12.17□□□□□ -0.46
SHMT2-202ENST00000414700 PRSS46E5RG02 174 aa12.17□□□□□ -0.46
SHMT2-202ENST00000414700 YPEL3P61236 119 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-202ENST00000414700 MLANAQ16655 118 aa12.17□□□□□ -0.46
SHMT2-202ENST00000414700 C2orf83Q53S99 150 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms