RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 CACNA1IQ9P0X4 2223 aa11.29□□□□□ -0.6
SMARCA4-202ENST00000413806 EVI2AP22794 236 aa11.29□□□□□ -0.6
SMARCA4-202ENST00000413806 COLCA1Q6ZS62 124 aa11.29□□□□□ -0.6
SMARCA4-202ENST00000413806 LGALS1P09382 135 aaKnown RBP11.29□□□□□ -0.6
SMARCA4-202ENST00000413806 ORMDL2Q53FV1 153 aa11.29□□□□□ -0.6
SMARCA4-202ENST00000413806 TIMM23O14925 209 aa11.29□□□□□ -0.6
SMARCA4-202ENST00000413806 LINC01559Q495D7 138 aa11.29□□□□□ -0.6
SMARCA4-202ENST00000413806 FAM90A2PQ658T7 463 aa11.29□□□□□ -0.6
SMARCA4-202ENST00000413806 C5orf63A6NC05 138 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 RHOGP84095 191 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 CD300EQ496F6 205 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 F2Z2F3 143 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 CDKN1BP46527 198 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 TMEM167AQ8TBQ9 72 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 VWA8A3KMH1 1905 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 IGHV2-26A0A0B4J1V2 119 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 HAX1O00165 279 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 TRGV9Q99603 122 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 LSM4Q9Y4Z0 139 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 E9PQ18 207 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 K7EP13 123 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 PF4P02776 101 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 CHAC1Q9BUX1 264 aa11.28□□□□□ -0.6
SMARCA4-202ENST00000413806 C9orf118A6NHY6 69 aa11.27□□□□□ -0.6
SMARCA4-202ENST00000413806 SMAD7O15105 426 aaKnown RBP11.27□□□□□ -0.6
SMARCA4-202ENST00000413806 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.6
SMARCA4-202ENST00000413806 AZU1P20160 251 aa11.27□□□□□ -0.6
SMARCA4-202ENST00000413806 TMEM200BQ69YZ2 307 aa11.27□□□□□ -0.6
SMARCA4-202ENST00000413806 BMPERQ8N8U9 685 aa11.27□□□□□ -0.6
SMARCA4-202ENST00000413806 MBNL3Q9NUK0 354 aaKnown RBP11.27□□□□□ -0.6
SMARCA4-202ENST00000413806 OOSP1A8MZH6 123 aa11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 IGHV1-8P0DP01 117 aa11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 SLC25A48Q6ZT89 311 aaKnown RBP11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 RPP25LQ8N5L8 163 aaKnown RBP11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 TOMM7Q9P0U1 55 aa11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 IGHV3OR16-8A0A075B7F1 116 aa11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 TMEM238C9JI98 176 aa11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 OVOL1O14753 267 aa11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 IFITM1P13164 125 aa11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 IFI27P40305 119 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-202ENST00000413806 TMEM178BH3BS89 294 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 FNDC10F2Z333 226 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 K7EP34 96 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 ETV2O00321 342 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 RNF144BQ7Z419 303 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 PRR31Q5SQ13 230 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 RPRMLQ8N4K4 120 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 SS18L2Q9UHA2 77 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 GAGE12HA6NDE8 117 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 LINC01549A6NIU2 74 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 SPATA31B1PQ5VZV4 182 aa11.26□□□□□ -0.61
SMARCA4-202ENST00000413806 HGFACQ04756 655 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 LAGE3Q14657 143 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 ZCCHC24Q8N2G6 241 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 ITLN2Q8WWU7 325 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 GHRHP01286 108 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 RALGAPA1Q6GYQ0 2036 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 IGHG3P01860 377 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 MBD3L4A6NDZ8 208 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 MBD3L3A6NE82 208 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 MBD3L5A6NJ08 208 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 MINOS1Q5TGZ0 78 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 MBD3L2Q8NHZ7 208 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 GAFA1Q96PS6 74 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 MINOS1-NBL1R4GNA1 71 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 IGHV1-3A0A0C4DH29 117 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 C9JAW5 83 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 H0YJW9 148 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 LINC01587Q99440 93 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 ANAPC10Q9UM13 185 aa11.25□□□□□ -0.61
SMARCA4-202ENST00000413806 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 SELLP14151 372 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 D6R8Y8 96 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 SLC25A20O43772 301 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 ZNF672Q499Z4 452 aaPredicted RBP11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 SPACA3Q8IXA5 215 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 FNDC1Q4ZHG4 1894 aaPredicted RBP11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 S100A7L2Q5SY68 101 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 LYNX1G3V0Z9 82 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 LYNX1P0DP58 116 aa11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 VDAC2P45880 294 aaPredicted RBP11.24□□□□□ -0.61
SMARCA4-202ENST00000413806 CD7P09564 240 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 PAX8Q06710 450 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 MRAPQ8TCY5 172 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 SLC25A39Q9BZJ4 359 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 SEPSECSQ9HD40 501 aaKnown RBP11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 TSC2P49815 1807 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 LINC00473A8K010 186 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 F8W1H4 67 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 WNT2P09544 360 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 IGLC2P0DOY2 106 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 IGLC3P0DOY3 106 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 Q0VG73 95 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 SIGLEC15Q6ZMC9 328 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms