RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 TTC32Q5I0X7 151 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 FAM169BQ8N8A8 192 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 GAGE12HA6NDE8 117 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 C21orf140B9A014 251 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 LGALS7P47929 136 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 SPANXN1Q5VSR9 72 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 MAFAQ8NHW3 353 aaPredicted RBP11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 ZC2HC1AQ96GY0 325 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 DOCK10Q96BY6 2186 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 GTF3C1Q12789 2109 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 OR4A5Q8NH83 315 aa11.32□□□□□ -0.6
CLTCL1-201ENST00000412649 TM4SF5O14894 197 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 GOSR1O95249 250 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 ANAPC13Q9BS18 74 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 NGBQ9NPG2 151 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 G3V4G9 280 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 ARMS2P0C7Q2 107 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 RAB9AP51151 201 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 CCL8P80075 99 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 VCX2Q9H322 139 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 TRAV17A0A0B4J275 112 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 SRRM5B3KS81 715 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 C10orf55Q5SWW7 151 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 IGF2BP2-AS1Q96M15 143 aa11.31□□□□□ -0.6
CLTCL1-201ENST00000412649 SCGB1A1P11684 91 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 MEF2CQ06413 473 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 GTSCR1Q86UQ5 136 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 DNAH12Q6ZR08 3092 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 RPL13AP40429 203 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 PRSS57Q6UWY2 283 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 C8orf46Q8TAG6 207 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 P0C879 139 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 ETDBQ3ZM63 59 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 Q86TA4 180 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 EXOC3-AS1Q8N2X6 119 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 ZNF747Q9BV97 191 aa11.3□□□□□ -0.6
CLTCL1-201ENST00000412649 F2RL2O00254 374 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 LGALS9BQ3B8N2 356 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 NXT2Q9NPJ8 142 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 TEX48A0A1B0GUV7 120 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 CD40P25942 277 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 UBALD2Q8IYN6 164 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 TP73-AS1Q9UF72 201 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 DKK1O94907 266 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 LINC01545Q5VT33 79 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 Q8N976 141 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 GEMIN7Q9H840 131 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 SMPXQ9UHP9 88 aa11.29□□□□□ -0.6
CLTCL1-201ENST00000412649 HAX1O00165 279 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 NDUFA3O95167 84 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 F8W1H4 67 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 SIVA1O15304 175 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 ZNF318Q5VUA4 2279 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 SNCGO76070 127 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 NCR2O95944 276 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 IGKV1-16P04430 117 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 KLF17Q5JT82 389 aaPredicted RBP11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 TEX29Q8N6K0 151 aa11.28□□□□□ -0.6
CLTCL1-201ENST00000412649 IGKV1D-17A0A075B6S4 117 aa11.27□□□□□ -0.6
CLTCL1-201ENST00000412649 C15orf65H3BRN8 121 aa11.27□□□□□ -0.6
CLTCL1-201ENST00000412649 CFHR2P36980 270 aa11.27□□□□□ -0.6
CLTCL1-201ENST00000412649 AMN1Q8IY45 258 aa11.27□□□□□ -0.6
CLTCL1-201ENST00000412649 MRAP2Q96G30 205 aa11.27□□□□□ -0.6
CLTCL1-201ENST00000412649 VGLL1Q99990 258 aa11.27□□□□□ -0.61
CLTCL1-201ENST00000412649 C1RLQ9NZP8 487 aa11.27□□□□□ -0.61
CLTCL1-201ENST00000412649 RPUSD1Q9UJJ7 312 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-201ENST00000412649 ZC2HC1BQ5TFG8 222 aa11.27□□□□□ -0.61
CLTCL1-201ENST00000412649 ASCL5Q7RTU5 278 aa11.27□□□□□ -0.61
CLTCL1-201ENST00000412649 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 PRR33A8MZF0 331 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 Q0VFX4 171 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 LINC01559Q495D7 138 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 TRGV9Q99603 122 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 LINC00312Q9Y6C7 94 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 PRB4P10163 310 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 DLX1P56177 255 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 PMS2CLQ68D20 193 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 C1orf162Q8NEQ5 155 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 RAXQ9Y2V3 346 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 MUC22E2RYF6 1773 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 ABCA1O95477 2261 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 H7C2G1 150 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 M0R3E3 92 aa11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 INTS1Q8N201 2190 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-201ENST00000412649 HEATR1Q9H583 2144 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-201ENST00000412649 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.25□□□□□ -0.61
CLTCL1-201ENST00000412649 MGPP08493 103 aa11.25□□□□□ -0.61
CLTCL1-201ENST00000412649 LTBRP36941 435 aa11.25□□□□□ -0.61
CLTCL1-201ENST00000412649 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms