RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 HAGHQ16775 308 aa9.77□□□□□ -0.85
HDAC8-210ENST00000412342 MGST2Q99735 147 aa9.77□□□□□ -0.85
HDAC8-210ENST00000412342 WDR83OSQ9Y284 106 aa9.77□□□□□ -0.85
HDAC8-210ENST00000412342 HELTA6NFD8 242 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 LINC00869P0C866 280 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 LYL1P12980 280 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 S100A11P31949 105 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 NUP62P37198 522 aaPredicted RBP9.76□□□□□ -0.85
HDAC8-210ENST00000412342 SELENOTP62341 195 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 EWSR1Q01844 656 aaKnown RBP eCLIP9.76□□□□□ -0.85
HDAC8-210ENST00000412342 NHLH2Q02577 135 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 ZNF124Q15973 351 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 STX12Q86Y82 276 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 C17orf77Q96MU5 243 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 TUBA4BQ9H853 241 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 UQCC1Q9NVA1 299 aa9.76□□□□□ -0.85
HDAC8-210ENST00000412342 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 H3BRN7 92 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 AGPAT2O15120 278 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 RLN2P04090 185 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 RPL11P62913 178 aaKnown RBP9.75□□□□□ -0.85
HDAC8-210ENST00000412342 PAFAH1B2P68402 229 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 C1orf194Q5T5A4 169 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 PATE2Q6UY27 113 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 SIGLEC15Q6ZMC9 328 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 ZNF546Q86UE3 836 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 APRG1Q8IVJ8 170 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 STXBP6Q8NFX7 210 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 TMEM147Q9BVK8 224 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 MED28Q9H204 178 aa9.75□□□□□ -0.85
HDAC8-210ENST00000412342 ZNF98A6NK75 572 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 DNASE2O00115 360 aaPredicted RBP9.74□□□□□ -0.85
HDAC8-210ENST00000412342 ORM2P19652 201 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 AP2S1P53680 142 aaPredicted RBP9.74□□□□□ -0.85
HDAC8-210ENST00000412342 HBG1P69891 147 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 HBG2P69892 147 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 ATP6V1FQ16864 119 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 OR5C1Q8NGR4 320 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 OR1B1Q8NGR6 318 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 GGTLC1Q9BX51 225 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 SLC25A31Q9H0C2 315 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 SLC25A32Q9H2D1 315 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 NRN1Q9NPD7 142 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 DOK5Q9P104 306 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 MBD2Q9UBB5 411 aa9.74□□□□□ -0.85
HDAC8-210ENST00000412342 UBE2L5PA0A1B0GUS4 154 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 SOCS3O14543 225 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 PET100P0DJ07 73 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 CAMLGP49069 296 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 CMC4P56277 68 aaPredicted RBP9.73□□□□□ -0.85
HDAC8-210ENST00000412342 DEFB131AP59861 70 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 PRR20EP86478 221 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 PRR20CP86479 221 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 PRR20DP86480 221 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 PRR20BP86481 221 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 PRR20AP86496 221 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 BAXQ07812 192 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 OPCMLQ14982 345 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 CHAC2Q8WUX2 184 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 SHANK2-AS3Q9BTD1 123 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 SCRT1Q9BWW7 348 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 SLC25A39Q9BZJ4 359 aaPredicted RBP9.73□□□□□ -0.85
HDAC8-210ENST00000412342 PFDN2Q9UHV9 154 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 U3KQK5 164 aa9.73□□□□□ -0.85
HDAC8-210ENST00000412342 LOC102724200A0A096LPH7 203 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-210ENST00000412342 HYPMO75409 117 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 PXDC1Q5TGL8 231 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 MIC13Q5XKP0 118 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 TMEM37Q8WXS4 190 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 PPP1R14BQ96C90 147 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 UHRF2Q96PU4 802 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 ARL6Q9H0F7 186 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 SEPSECSQ9HD40 501 aaKnown RBP9.72□□□□□ -0.85
HDAC8-210ENST00000412342 FBXL17Q9UF56 701 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 HIGD1AQ9Y241 93 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 HSPB11Q9Y547 144 aa9.72□□□□□ -0.85
HDAC8-210ENST00000412342 DNAH7Q8WXX0 4024 aa9.71□□□□□ -0.85
HDAC8-210ENST00000412342 MRPS12O15235 138 aaKnown RBP9.71□□□□□ -0.86
HDAC8-210ENST00000412342 GIPP09681 153 aaPredicted RBP9.71□□□□□ -0.86
HDAC8-210ENST00000412342 ZNF688P0C7X2 276 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 RPL29P47914 159 aaKnown RBP9.71□□□□□ -0.86
HDAC8-210ENST00000412342 RAP2BP61225 183 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 Q5BKY6 102 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 LEMD1Q68G75 181 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 OR8I2Q8N0Y5 310 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 RCHY1Q96PM5 261 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 SPATA25Q9BR10 227 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 ARV1Q9H2C2 271 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 SLC25A22Q9H936 323 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 RETNQ9HD89 108 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 AGRNO00468 2067 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 NBEAL2Q6ZNJ1 2754 aa9.71□□□□□ -0.86
HDAC8-210ENST00000412342 G3V3Q6 166 aa9.7□□□□□ -0.86
HDAC8-210ENST00000412342 MPDU1O75352 247 aa9.7□□□□□ -0.86
HDAC8-210ENST00000412342 OR5G3P0C626 314 aa9.7□□□□□ -0.86
HDAC8-210ENST00000412342 FGF7P21781 194 aa9.7□□□□□ -0.86
HDAC8-210ENST00000412342 RPL12P30050 165 aaKnown RBP9.7□□□□□ -0.86
HDAC8-210ENST00000412342 CLINT1Q14677 625 aa9.7□□□□□ -0.86
HDAC8-210ENST00000412342 MORN5Q5VZ52 161 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms