RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 WDR73Q6P4I2 378 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 HIST3H2BBQ8N257 126 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 TBX15Q96SF7 602 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 OTORQ9NRC9 128 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 TRAPPC1Q9Y5R8 145 aa10.74□□□□□ -0.69
LIMS1-205ENST00000410093 PGPEP1LA6NFU8 196 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 NCBP2LA6PVI3 153 aaKnown RBP10.73□□□□□ -0.69
LIMS1-205ENST00000410093 IGKV1-17P01599 117 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 IGHV3-48P01763 117 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 PYYP10082 97 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 DSCR9P59020 149 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 RPL15P61313 204 aaKnown RBP10.73□□□□□ -0.69
LIMS1-205ENST00000410093 RASL11AQ6T310 242 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 BPIFA4PQ86YQ2 179 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 VN1R17PQ8TDU5 208 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 NRGNQ92686 78 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 FMC1Q96HJ9 113 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 ATG101Q9BSB4 218 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 SLC25A39Q9BZJ4 359 aaPredicted RBP10.73□□□□□ -0.69
LIMS1-205ENST00000410093 V9GYV3 84 aa10.73□□□□□ -0.69
LIMS1-205ENST00000410093 TACC2O95359 2948 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 TRBV6-1A0A0K0K1D8 114 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 NDUFS7O75251 213 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 IGLV2-8P01709 118 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 LYZP61626 148 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 UBE2G1P62253 170 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 PAX8Q06710 450 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 IBA57Q5T440 356 aaKnown RBP10.72□□□□□ -0.69
LIMS1-205ENST00000410093 ARL6IP6Q8N6S5 226 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 FAM168AQ92567 244 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 CCL19Q99731 98 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 SHANK2-AS3Q9BTD1 123 aa10.72□□□□□ -0.69
LIMS1-205ENST00000410093 ANKRD17O75179 2603 aaKnown RBP10.71□□□□□ -0.69
LIMS1-205ENST00000410093 WI2-2373I1.2A0A1W2PRP0 233 aa10.71□□□□□ -0.69
LIMS1-205ENST00000410093 NPFFO15130 113 aa10.71□□□□□ -0.69
LIMS1-205ENST00000410093 GNG7O60262 68 aa10.71□□□□□ -0.69
LIMS1-205ENST00000410093 IGHV4-39P01824 125 aa10.71□□□□□ -0.69
LIMS1-205ENST00000410093 SLC25A5P05141 298 aaKnown RBP10.71□□□□□ -0.69
LIMS1-205ENST00000410093 BAGE2Q86Y30 109 aa10.71□□□□□ -0.69
LIMS1-205ENST00000410093 OR4F17Q8NGA8 305 aa10.71□□□□□ -0.69
LIMS1-205ENST00000410093 ATP6V0BQ99437 205 aa10.71□□□□□ -0.69
LIMS1-205ENST00000410093 GNB1LQ9BYB4 327 aa10.71□□□□□ -0.69
LIMS1-205ENST00000410093 AURKAIP1Q9NWT8 199 aaPredicted RBP10.71□□□□□ -0.69
LIMS1-205ENST00000410093 POLQO75417 2590 aa10.71□□□□□ -0.7
LIMS1-205ENST00000410093 PDZD2O15018 2839 aa10.71□□□□□ -0.7
LIMS1-205ENST00000410093 CCDC168Q8NDH2 2452 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 PGPA6NDG6 321 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 H3BRN7 92 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 APELAP0DMC3 54 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 RANP62826 216 aaKnown RBP10.7□□□□□ -0.7
LIMS1-205ENST00000410093 PDE6HQ13956 83 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 CLEC2AQ6UVW9 174 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 ZNF600Q6ZNG1 722 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 Q8N9W7 124 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 FAM110DQ8TAY7 271 aaPredicted RBP10.7□□□□□ -0.7
LIMS1-205ENST00000410093 RNF125Q96EQ8 232 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 GPR82Q96P67 336 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 FANCD2OSQ96PS1 177 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 FOXC2Q99958 501 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 C21orf62Q9NYP8 219 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 ARHGAP32A7KAX9 2087 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 AKAP9Q99996 3911 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 SPG11Q96JI7 2443 aa10.7□□□□□ -0.7
LIMS1-205ENST00000410093 SERTM2A0A1B0GWG4 89 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 A0A1W2PRD5 423 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 A0A1W2PRF3 423 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 A0A1W2PRM7 423 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 SMIM27A0A1W2PRY6 76 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 XKRY2A2RUG3 117 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 PAX1P15863 534 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 SAA4P35542 130 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 RAB9AP51151 201 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 CT83Q5H943 113 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 ASPHD1Q5U4P2 390 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 DYNAPQ8N1N2 210 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 ZNF491Q8N8L2 437 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
LIMS1-205ENST00000410093 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 FBLL1A6NHQ2 334 aaKnown RBP10.68□□□□□ -0.7
LIMS1-205ENST00000410093 VWC2LB2RUY7 222 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 K7EQM0 130 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 MGST1P10620 155 aaKnown RBP10.68□□□□□ -0.7
LIMS1-205ENST00000410093 HNF1AP20823 631 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 RUSC1-AS1Q66K80 236 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 CMTM2Q8TAZ6 248 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 GRAMD2BQ96HH9 432 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 Q9H3A6 140 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 ZNF492Q9P255 531 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 IGHV3-21A0A0B4J1V1 117 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 ZNF705GA8MUZ8 300 aaPredicted RBP10.68□□□□□ -0.7
LIMS1-205ENST00000410093 GATCO43716 136 aaKnown RBP10.68□□□□□ -0.7
LIMS1-205ENST00000410093 NDUFB8O95169 186 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 TCRAP04437 139 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 BLNKQ8WV28 456 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 TMEM18Q96B42 140 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 AJUBAQ96IF1 538 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 GPR61Q9BZJ8 451 aa10.68□□□□□ -0.7
LIMS1-205ENST00000410093 HRNRQ86YZ3 2850 aaPredicted RBP10.67□□□□□ -0.7
LIMS1-205ENST00000410093 OTOGQ6ZRI0 2925 aa10.67□□□□□ -0.7
LIMS1-205ENST00000410093 CENPVL3A0A0U1RRI6 287 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms