RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 GATA2P23769 480 aaPredicted RBP15.35■□□□□ 0.05
VSX1-204ENST00000409958 ZNF124Q15973 351 aa15.35■□□□□ 0.05
VSX1-204ENST00000409958 PPP1R14BQ96C90 147 aa15.35■□□□□ 0.05
VSX1-204ENST00000409958 NMES1Q9C002 83 aa15.35■□□□□ 0.05
VSX1-204ENST00000409958 RETNQ9HD89 108 aa15.35■□□□□ 0.05
VSX1-204ENST00000409958 NRN1Q9NPD7 142 aa15.35■□□□□ 0.05
VSX1-204ENST00000409958 LYRM2Q9NU23 88 aaPredicted RBP15.35■□□□□ 0.05
VSX1-204ENST00000409958 FBXL17Q9UF56 701 aa15.35■□□□□ 0.05
VSX1-204ENST00000409958 FAM24AA6NFZ4 105 aa15.34■□□□□ 0.05
VSX1-204ENST00000409958 UBE2CO00762 179 aa15.34■□□□□ 0.05
VSX1-204ENST00000409958 SELENOTP62341 195 aa15.34■□□□□ 0.05
VSX1-204ENST00000409958 TEPPQ6URK8 271 aa15.34■□□□□ 0.05
VSX1-204ENST00000409958 PTTG1O95997 202 aa15.33■□□□□ 0.04
VSX1-204ENST00000409958 RPL35AP18077 110 aaKnown RBP15.33■□□□□ 0.04
VSX1-204ENST00000409958 S100A7P31151 101 aa15.33■□□□□ 0.04
VSX1-204ENST00000409958 CYCSP99999 105 aaKnown RBP15.33■□□□□ 0.04
VSX1-204ENST00000409958 SLC38A11Q08AI6 406 aa15.33■□□□□ 0.04
VSX1-204ENST00000409958 SEPSECSQ9HD40 501 aaKnown RBP15.33■□□□□ 0.04
VSX1-204ENST00000409958 SSNA1O43805 119 aa15.32■□□□□ 0.04
VSX1-204ENST00000409958 CST7O76096 145 aa15.32■□□□□ 0.04
VSX1-204ENST00000409958 ZNF688P0C7X2 276 aa15.32■□□□□ 0.04
VSX1-204ENST00000409958 ORM2P19652 201 aa15.32■□□□□ 0.04
VSX1-204ENST00000409958 PLP1P60201 277 aa15.32■□□□□ 0.04
VSX1-204ENST00000409958 LEMD1Q68G75 181 aa15.32■□□□□ 0.04
VSX1-204ENST00000409958 Q6ZWC4 215 aa15.32■□□□□ 0.04
VSX1-204ENST00000409958 TMEM252Q8N6L7 170 aa15.32■□□□□ 0.04
VSX1-204ENST00000409958 TMEM147Q9BVK8 224 aa15.32■□□□□ 0.04
VSX1-204ENST00000409958 RLN2P04090 185 aa15.31■□□□□ 0.04
VSX1-204ENST00000409958 SULT1A1P50225 295 aa15.31■□□□□ 0.04
VSX1-204ENST00000409958 STX12Q86Y82 276 aa15.31■□□□□ 0.04
VSX1-204ENST00000409958 OR8I2Q8N0Y5 310 aa15.31■□□□□ 0.04
VSX1-204ENST00000409958 OR1B1Q8NGR6 318 aa15.31■□□□□ 0.04
VSX1-204ENST00000409958 EDA2RQ9HAV5 297 aa15.31■□□□□ 0.04
VSX1-204ENST00000409958 IGSF23A1L1A6 192 aa15.3■□□□□ 0.04
VSX1-204ENST00000409958 ZNF98A6NK75 572 aa15.3■□□□□ 0.04
VSX1-204ENST00000409958 LINC00869P0C866 280 aa15.3■□□□□ 0.04
VSX1-204ENST00000409958 H2BFSP57053 126 aa15.3■□□□□ 0.04
VSX1-204ENST00000409958 SNRPD3P62318 126 aaKnown RBP15.3■□□□□ 0.04
VSX1-204ENST00000409958 TMEM217Q8N7C4 229 aa15.3■□□□□ 0.04
VSX1-204ENST00000409958 OVOL2Q9BRP0 275 aa15.3■□□□□ 0.04
VSX1-204ENST00000409958 TP53TG1Q9Y2A0 90 aa15.3■□□□□ 0.04
VSX1-204ENST00000409958 HYPMO75409 117 aa15.29■□□□□ 0.04
VSX1-204ENST00000409958 S100A11P31949 105 aa15.29■□□□□ 0.04
VSX1-204ENST00000409958 ZNF546Q86UE3 836 aa15.29■□□□□ 0.04
VSX1-204ENST00000409958 CSTL1Q9H114 145 aa15.29■□□□□ 0.04
VSX1-204ENST00000409958 UQCC1Q9NVA1 299 aa15.29■□□□□ 0.04
VSX1-204ENST00000409958 E5RGE8 158 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 AGPAT2O15120 278 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 RAP2BP61225 183 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 HBG1P69891 147 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 HBG2P69892 147 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 VWC2Q2TAL6 325 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 PSMG4Q5JS54 123 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 STHQ8IWL8 128 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 SLC25A22Q9H936 323 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 DOK5Q9P104 306 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 HIGD1AQ9Y241 93 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 DNAH7Q8WXX0 4024 aa15.28■□□□□ 0.04
VSX1-204ENST00000409958 H3BRN7 92 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 GALR1P47211 349 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 DEFB135Q30KP9 77 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 LRRC37A5PQ49AS3 106 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 PXDC1Q5TGL8 231 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 S100A7AQ86SG5 101 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 GPR82Q96P67 336 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 MGST2Q99735 147 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 SHANK2-AS3Q9BTD1 123 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 SLC25A39Q9BZJ4 359 aaPredicted RBP15.27■□□□□ 0.04
VSX1-204ENST00000409958 SLC25A32Q9H2D1 315 aa15.27■□□□□ 0.04
VSX1-204ENST00000409958 H0YIZ8 118 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 C3orf84H3BNL1 204 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 SPRY2O43597 315 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 OR5G3P0C626 314 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 RAB31Q13636 194 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 ATP6V1FQ16864 119 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 SAMD13Q5VXD3 122 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 MUC7Q8TAX7 377 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 PPP1R1CQ8WVI7 109 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 RNF183Q96D59 192 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 SLC25A31Q9H0C2 315 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 OR5AC2Q9NZP5 309 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 WDR83OSQ9Y284 106 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 ALG5Q9Y673 324 aa15.26■□□□□ 0.03
VSX1-204ENST00000409958 AGRNO00468 2067 aa15.25■□□□□ 0.03
VSX1-204ENST00000409958 KNCNA6PVL3 124 aa15.25■□□□□ 0.03
VSX1-204ENST00000409958 SOCS3O14543 225 aa15.25■□□□□ 0.03
VSX1-204ENST00000409958 ID1P41134 155 aa15.25■□□□□ 0.03
VSX1-204ENST00000409958 TRPT1Q86TN4 253 aaKnown RBP15.25■□□□□ 0.03
VSX1-204ENST00000409958 SCRT1Q9BWW7 348 aa15.25■□□□□ 0.03
VSX1-204ENST00000409958 ARL6Q9H0F7 186 aa15.25■□□□□ 0.03
VSX1-204ENST00000409958 CAMLGP49069 296 aa15.24■□□□□ 0.03
VSX1-204ENST00000409958 PSMB3P49720 205 aa15.24■□□□□ 0.03
VSX1-204ENST00000409958 MEOX2P50222 304 aa15.24■□□□□ 0.03
VSX1-204ENST00000409958 ACTL10Q5JWF8 245 aa15.24■□□□□ 0.03
VSX1-204ENST00000409958 PATE2Q6UY27 113 aa15.24■□□□□ 0.03
VSX1-204ENST00000409958 ARV1Q9H2C2 271 aa15.24■□□□□ 0.03
VSX1-204ENST00000409958 RNF24Q9Y225 148 aa15.24■□□□□ 0.03
VSX1-204ENST00000409958 UBE2L5PA0A1B0GUS4 154 aa15.23■□□□□ 0.03
VSX1-204ENST00000409958 ISLRO14498 428 aa15.23■□□□□ 0.03
VSX1-204ENST00000409958 PET100P0DJ07 73 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms