RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TMEM182Q6ZP80 229 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 OR1L4Q8NGR5 311 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 STOML3Q8TAV4 291 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 NARS2Q96I59 477 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 ZNF414Q96IQ9 312 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 METTL26Q96S19 204 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 ELOVL1Q9BW60 279 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 ARV1Q9H2C2 271 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 RABAC1Q9UI14 185 aa12.6□□□□□ -0.39
TSPAN4-208ENST00000409531 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-208ENST00000409531 HYPMO75409 117 aa12.59□□□□□ -0.39
TSPAN4-208ENST00000409531 ORM2P19652 201 aa12.59□□□□□ -0.39
TSPAN4-208ENST00000409531 BMI1P35226 326 aa12.59□□□□□ -0.39
TSPAN4-208ENST00000409531 BAP18Q8IXM2 172 aa12.59□□□□□ -0.39
TSPAN4-208ENST00000409531 OR1B1Q8NGR6 318 aa12.59□□□□□ -0.39
TSPAN4-208ENST00000409531 MARC2Q969Z3 335 aa12.59□□□□□ -0.39
TSPAN4-208ENST00000409531 PFDN5Q99471 154 aa12.59□□□□□ -0.39
TSPAN4-208ENST00000409531 IGHV3OR16-8A0A075B7F1 116 aa12.58□□□□□ -0.4
TSPAN4-208ENST00000409531 USF2Q15853 346 aaPredicted RBP12.58□□□□□ -0.4
TSPAN4-208ENST00000409531 FFAR4Q5NUL3 377 aa12.58□□□□□ -0.4
TSPAN4-208ENST00000409531 EIF5AL1Q6IS14 154 aaKnown RBP12.58□□□□□ -0.4
TSPAN4-208ENST00000409531 OR2G3Q8NGZ4 309 aa12.58□□□□□ -0.4
TSPAN4-208ENST00000409531 RNF24Q9Y225 148 aa12.58□□□□□ -0.4
TSPAN4-208ENST00000409531 HIGD1AQ9Y241 93 aa12.58□□□□□ -0.4
TSPAN4-208ENST00000409531 A0A1W2PS18 150 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 MBP02144 154 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 OR5G3P0C626 314 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 SPP1P10451 314 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 CRYBB3P26998 211 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 TM4SF20Q53R12 229 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 GATAD1Q8WUU5 269 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 MCRIP2Q9BUT9 160 aaKnown RBP12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 SLC25A32Q9H2D1 315 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 DNAJC4Q9NNZ3 241 aa12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 MRPL27Q9P0M9 148 aaKnown RBP12.57□□□□□ -0.4
TSPAN4-208ENST00000409531 IGHV7-4-1A0A0J9YVY3 117 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 TMEM213A2RRL7 107 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 C2orf70A6NJV1 201 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 ZNF207O43670 478 aaKnown RBP12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 SEC11BP0C7V7 166 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 ACOT6Q3I5F7 207 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 C10orf113Q5VZT2 155 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 GRAMD2BQ96HH9 432 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 RNF2Q99496 336 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 SH3BGRL3Q9H299 93 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 TMEM231Q9H6L2 316 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 SIGLEC8Q9NYZ4 499 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 DOK5Q9P104 306 aa12.56□□□□□ -0.4
TSPAN4-208ENST00000409531 M6PRP20645 277 aa12.55□□□□□ -0.4
TSPAN4-208ENST00000409531 CBLN1P23435 193 aa12.55□□□□□ -0.4
TSPAN4-208ENST00000409531 ST8SIA2Q92186 375 aa12.55□□□□□ -0.4
TSPAN4-208ENST00000409531 GPR61Q9BZJ8 451 aa12.55□□□□□ -0.4
TSPAN4-208ENST00000409531 SMPXQ9UHP9 88 aa12.55□□□□□ -0.4
TSPAN4-208ENST00000409531 C8orf88P0DMB2 117 aa12.54□□□□□ -0.4
TSPAN4-208ENST00000409531 FOLR2P14207 255 aa12.54□□□□□ -0.4
TSPAN4-208ENST00000409531 AKR1C8PQ5T2L2 129 aa12.54□□□□□ -0.4
TSPAN4-208ENST00000409531 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
TSPAN4-208ENST00000409531 SEC14L6B5MCN3 397 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 CD5P06127 495 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 CSN3P07498 182 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 INSL3P51460 131 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 C1orf194Q5T5A4 169 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 PATE2Q6UY27 113 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 IL34Q6ZMJ4 242 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 LINC00305Q7Z4B0 112 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 TMEM37Q8WXS4 190 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 PHYHIPLQ96FC7 376 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 RHPN1-AS1Q9BWJ2 59 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 MRPL32Q9BYC8 188 aaKnown RBP12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 SLC25A39Q9BZJ4 359 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 RFNGQ9Y644 331 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 U3KQE9 123 aa12.53□□□□□ -0.4
TSPAN4-208ENST00000409531 ZNF98A6NK75 572 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 UMAD1C9J7I0 102 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 H3BRN7 92 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 CHEK1O14757 476 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 BUB3O43684 328 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 SAP30O75446 220 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 RHOBP62745 196 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 TMEM41BQ5BJD5 291 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 C9orf66Q5T8R8 295 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 FAM78BQ5VT40 261 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 OR10G4Q8NGN3 311 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 OR10G9Q8NGN4 311 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 OR10G7Q8NGN6 311 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 DYNLRB2Q8TF09 96 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 UHRF2Q96PU4 802 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 SHANK2-AS3Q9BTD1 123 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 VSIRQ9H7M9 311 aa12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 TECRQ9NZ01 308 aaKnown RBP12.52□□□□□ -0.41
TSPAN4-208ENST00000409531 IGHV3-49A0A0A0MS15 119 aa12.51□□□□□ -0.41
TSPAN4-208ENST00000409531 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
TSPAN4-208ENST00000409531 GCSAMLQ5JQS6 135 aa12.51□□□□□ -0.41
TSPAN4-208ENST00000409531 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
TSPAN4-208ENST00000409531 GPR82Q96P67 336 aa12.51□□□□□ -0.41
TSPAN4-208ENST00000409531 IGHV3OR16-13A0A075B7E8 117 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 IGHV3-74A0A0B4J1X5 117 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 APOHP02749 345 aaPredicted RBP12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 PRB2P02812 416 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms