RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 DSPPQ9NZW4 1301 aa6.02□□□□□ -1.45
SCN9A-202ENST00000409435 GAGE12HA6NDE8 117 aa6.02□□□□□ -1.45
SCN9A-202ENST00000409435 REG1AP05451 166 aa6.02□□□□□ -1.45
SCN9A-202ENST00000409435 INAFM2P0DMQ5 153 aa6.02□□□□□ -1.45
SCN9A-202ENST00000409435 AZU1P20160 251 aa6.02□□□□□ -1.45
SCN9A-202ENST00000409435 UCP1P25874 307 aa6.02□□□□□ -1.45
SCN9A-202ENST00000409435 RHOGP84095 191 aa6.02□□□□□ -1.45
SCN9A-202ENST00000409435 CD300LDQ6UXZ3 194 aa6.02□□□□□ -1.45
SCN9A-202ENST00000409435 BCL6BQ8N143 479 aaPredicted RBP6.02□□□□□ -1.45
SCN9A-202ENST00000409435 SPATA25Q9BR10 227 aa6.02□□□□□ -1.45
SCN9A-202ENST00000409435 MRPL32Q9BYC8 188 aaKnown RBP6.02□□□□□ -1.45
SCN9A-202ENST00000409435 BDP1A6H8Y1 2624 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 HBDP02042 147 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 RBMY1FQ15415 496 aaKnown RBP6.01□□□□□ -1.45
SCN9A-202ENST00000409435 ORMDL3Q8N138 153 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 CHCHD1Q96BP2 118 aaKnown RBP6.01□□□□□ -1.45
SCN9A-202ENST00000409435 PIEZO1Q92508 2521 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 IGHV3OR16-13A0A075B7E8 117 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 IGHV3-49A0A0A0MS15 119 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 IGHV3-74A0A0B4J1X5 117 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 H3BMM0 161 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 HOGA1Q86XE5 327 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 UBE2WQ96B02 151 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 SMAD5-AS1Q9Y6J3 95 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 IFITM3Q01628 133 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 KIR3DS1Q14943 382 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 WDR82Q6UXN9 313 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 A0A1B0GUT8 65 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 H3BTX0 84 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 FXYD1O00168 92 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 NDUFS7O75251 213 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 CDKN1BP46527 198 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 TCTEX1D4Q5JR98 221 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 UTF1Q5T230 341 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 USMG5Q96IX5 58 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 NAA38Q9BRA0 125 aaKnown RBP6.01□□□□□ -1.45
SCN9A-202ENST00000409435 OTOGLQ3ZCN5 2332 aa6.01□□□□□ -1.45
SCN9A-202ENST00000409435 TRAV14DV4A0A0A6YYC5 116 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 IGHV3-66A0A0C4DH42 116 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 C19orf84I3L1E1 186 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 ADMP35318 185 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 LEPP41159 167 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 PCNX2A6NKB5 2137 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 FAM90A26D6RGX4 464 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 IGHV1-8P0DP01 117 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 RPL32P62910 135 aaKnown RBP6□□□□□ -1.45
SCN9A-202ENST00000409435 ZNF436-AS1Q8NC38 126 aaPredicted RBP6□□□□□ -1.45
SCN9A-202ENST00000409435 LAMTOR3Q9UHA4 124 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 IGLV1-36A0A0B4J1U3 117 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 TRGV4A0A0C4DH28 118 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 SOCS1O15524 211 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 SRP19P09132 144 aaKnown RBP6□□□□□ -1.45
SCN9A-202ENST00000409435 C1QL4Q86Z23 238 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 OSR1Q8TAX0 266 aaPredicted RBP6□□□□□ -1.45
SCN9A-202ENST00000409435 ZNF837Q96EG3 531 aaPredicted RBP6□□□□□ -1.45
SCN9A-202ENST00000409435 HS3ST6Q96QI5 342 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 SDF2L1Q9HCN8 221 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 ASIPP42127 132 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 DUX4L9Q6RFH8 374 aaPredicted RBP6□□□□□ -1.45
SCN9A-202ENST00000409435 PPP1R3EQ9H7J1 279 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 FRRS1LQ9P0K9 344 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 ZFC3H1O60293 1989 aaKnown RBP6□□□□□ -1.45
SCN9A-202ENST00000409435 IGKV3OR2-268A0A0C4DH90 116 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 F8W1H4 67 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 AMBPP02760 352 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 SCTP09683 121 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 CRYBA2P53672 197 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 RNF144BQ7Z419 303 aa6□□□□□ -1.45
SCN9A-202ENST00000409435 MALP21145 153 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 TMEM200BQ69YZ2 307 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 ATRAIDQ6UW56 229 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 FAM159AQ6UWV7 190 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 TMEM86BQ8N661 226 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 IGKV1D-42A0A075B6H8 117 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 LINC01549A6NIU2 74 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 KNCNA6PVL3 124 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 IGHV2-5P01817 119 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 B3GALT5-AS1P59052 145 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 MPV17L2Q567V2 206 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 MIC13Q5XKP0 118 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 OR11H4Q8NGC9 324 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 MSGN1A6NI15 193 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 PIN1P1O15428 100 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 PAX8Q06710 450 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 UNC119Q13432 240 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 CHTOPQ9Y3Y2 248 aaKnown RBP5.99□□□□□ -1.45
SCN9A-202ENST00000409435 C9JAW5 83 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 GZMBP10144 247 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 GCHFRP30047 84 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 GATD1Q8NB37 220 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 COQ2Q96H96 371 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 RPP21Q9H633 154 aaKnown RBP5.99□□□□□ -1.45
SCN9A-202ENST00000409435 S4R3C0 116 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 A0A1W2PNU3 283 aaPredicted RBP5.99□□□□□ -1.45
SCN9A-202ENST00000409435 EGR1P18146 543 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 NUP210Q8TEM1 1887 aaPredicted RBP5.99□□□□□ -1.45
SCN9A-202ENST00000409435 TMEM222Q9H0R3 208 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 TOMM7Q9P0U1 55 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 TNFRSF18Q9Y5U5 241 aa5.99□□□□□ -1.45
SCN9A-202ENST00000409435 GBF1Q92538 1859 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms