RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 STPG3Q8N7X2 389 aa15.17■□□□□ 0.02
PTCD3-202ENST00000409326 C19orf73Q9NVV2 129 aa15.17■□□□□ 0.02
PTCD3-202ENST00000409326 TRAV2A0A0B4J234 112 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 ORM2P19652 201 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 RPL12P30050 165 aaKnown RBP15.16■□□□□ 0.02
PTCD3-202ENST00000409326 RAP2BP61225 183 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 FGL1Q08830 312 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 RAB31Q13636 194 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 GBGT1Q8N5D6 347 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 OR1B1Q8NGR6 318 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 B9D2Q9BPU9 175 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 WFDC10AQ9H1F0 79 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 MS4A6AQ9H2W1 248 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 HSPB11Q9Y547 144 aa15.16■□□□□ 0.02
PTCD3-202ENST00000409326 OR11H12B2RN74 326 aa15.15■□□□□ 0.02
PTCD3-202ENST00000409326 S100A7P31151 101 aa15.15■□□□□ 0.02
PTCD3-202ENST00000409326 TFPI2P48307 235 aa15.15■□□□□ 0.02
PTCD3-202ENST00000409326 CAMLGP49069 296 aa15.15■□□□□ 0.02
PTCD3-202ENST00000409326 AP2S1P53680 142 aaPredicted RBP15.15■□□□□ 0.02
PTCD3-202ENST00000409326 C1orf194Q5T5A4 169 aa15.15■□□□□ 0.02
PTCD3-202ENST00000409326 PPP1R14BQ96C90 147 aa15.15■□□□□ 0.02
PTCD3-202ENST00000409326 GGTLC1Q9BX51 225 aa15.15■□□□□ 0.02
PTCD3-202ENST00000409326 DNASE2O00115 360 aaPredicted RBP15.14■□□□□ 0.01
PTCD3-202ENST00000409326 MPDU1O75352 247 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 FRMD6-AS1P0C7T7 363 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 FGF7P21781 194 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 CLINT1Q14677 625 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 ODF3L2Q3SX64 289 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 PXDC1Q5TGL8 231 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 SIGLEC15Q6ZMC9 328 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 DEFB125Q8N687 156 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 STXBP6Q8NFX7 210 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 FAM110AQ9BQ89 295 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 DOK5Q9P104 306 aa15.14■□□□□ 0.01
PTCD3-202ENST00000409326 HYPMO75409 117 aa15.13■□□□□ 0.01
PTCD3-202ENST00000409326 CHAC2Q8WUX2 184 aa15.13■□□□□ 0.01
PTCD3-202ENST00000409326 ARL6Q9H0F7 186 aa15.13■□□□□ 0.01
PTCD3-202ENST00000409326 FBXL17Q9UF56 701 aa15.13■□□□□ 0.01
PTCD3-202ENST00000409326 UBQLN2Q9UHD9 624 aa15.13■□□□□ 0.01
PTCD3-202ENST00000409326 HIGD1AQ9Y241 93 aa15.13■□□□□ 0.01
PTCD3-202ENST00000409326 TGP01266 2768 aa15.13■□□□□ 0.01
PTCD3-202ENST00000409326 ZNF98A6NK75 572 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 H3BRN7 92 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 PRR20EP86478 221 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 PRR20CP86479 221 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 PRR20DP86480 221 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 PRR20BP86481 221 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 PRR20AP86496 221 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 OPCMLQ14982 345 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 Q5BKY6 102 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 WFDC3Q8IUB2 231 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 OR2T35Q8NGX2 323 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 DCANP1Q8TF63 244 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 ATP5SQ99766 215 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 SLC25A39Q9BZJ4 359 aaPredicted RBP15.12■□□□□ 0.01
PTCD3-202ENST00000409326 TUBA4BQ9H853 241 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 SRD5A3Q9H8P0 318 aa15.12■□□□□ 0.01
PTCD3-202ENST00000409326 K7EQG2 157 aa15.11■□□□□ 0.01
PTCD3-202ENST00000409326 OR5G3P0C626 314 aa15.11■□□□□ 0.01
PTCD3-202ENST00000409326 RPL29P47914 159 aaKnown RBP15.11■□□□□ 0.01
PTCD3-202ENST00000409326 CMC4P56277 68 aaPredicted RBP15.11■□□□□ 0.01
PTCD3-202ENST00000409326 MIC13Q5XKP0 118 aa15.11■□□□□ 0.01
PTCD3-202ENST00000409326 S100A7AQ86SG5 101 aa15.11■□□□□ 0.01
PTCD3-202ENST00000409326 OR8I2Q8N0Y5 310 aa15.11■□□□□ 0.01
PTCD3-202ENST00000409326 NPCDR1Q9BY65 106 aa15.11■□□□□ 0.01
PTCD3-202ENST00000409326 PATE2Q6UY27 113 aa15.1■□□□□ 0.01
PTCD3-202ENST00000409326 AQP10Q96PS8 301 aa15.1■□□□□ 0.01
PTCD3-202ENST00000409326 SHANK2-AS3Q9BTD1 123 aa15.1■□□□□ 0.01
PTCD3-202ENST00000409326 SCRT1Q9BWW7 348 aa15.1■□□□□ 0.01
PTCD3-202ENST00000409326 WDR61Q9GZS3 305 aaKnown RBP15.1■□□□□ 0.01
PTCD3-202ENST00000409326 ARV1Q9H2C2 271 aa15.1■□□□□ 0.01
PTCD3-202ENST00000409326 SLC25A22Q9H936 323 aa15.1■□□□□ 0.01
PTCD3-202ENST00000409326 MAP6D1Q9H9H5 199 aa15.1■□□□□ 0.01
PTCD3-202ENST00000409326 NRN1Q9NPD7 142 aa15.1■□□□□ 0.01
PTCD3-202ENST00000409326 B2MP61769 119 aa15.09■□□□□ 0.01
PTCD3-202ENST00000409326 Q6ZRG5 221 aa15.09■□□□□ 0.01
PTCD3-202ENST00000409326 FAM24BQ8N5W8 94 aa15.09■□□□□ 0.01
PTCD3-202ENST00000409326 UHRF2Q96PU4 802 aa15.09■□□□□ 0.01
PTCD3-202ENST00000409326 SMIM3Q9BZL3 60 aa15.09■□□□□ 0.01
PTCD3-202ENST00000409326 SLC25A32Q9H2D1 315 aa15.09■□□□□ 0.01
PTCD3-202ENST00000409326 PXMP4Q9Y6I8 212 aa15.09■□□□□ 0.01
PTCD3-202ENST00000409326 COL7A1Q02388 2944 aa15.08■□□□□ 0
PTCD3-202ENST00000409326 ELOA3CA0A087WX78 387 aaPredicted RBP15.08■□□□□ 0
PTCD3-202ENST00000409326 G3V3Q6 166 aa15.08■□□□□ 0
PTCD3-202ENST00000409326 COX7A2P2O60397 106 aa15.08■□□□□ 0
PTCD3-202ENST00000409326 LINC00322Q6ZN03 302 aaPredicted RBP15.08■□□□□ 0
PTCD3-202ENST00000409326 TMEM37Q8WXS4 190 aa15.08■□□□□ 0
PTCD3-202ENST00000409326 GPR82Q96P67 336 aa15.08■□□□□ 0
PTCD3-202ENST00000409326 CITED4Q96RK1 184 aa15.08■□□□□ 0
PTCD3-202ENST00000409326 SLC39A9Q9NUM3 307 aa15.08■□□□□ 0
PTCD3-202ENST00000409326 RBMY1BA6NDE4 496 aaKnown RBP15.07■□□□□ 0
PTCD3-202ENST00000409326 RBMY1EA6NEQ0 496 aaKnown RBP15.07■□□□□ 0
PTCD3-202ENST00000409326 RBMY1DP0C7P1 496 aaKnown RBP15.07■□□□□ 0
PTCD3-202ENST00000409326 GALR1P47211 349 aa15.07■□□□□ 0
PTCD3-202ENST00000409326 LEMD1Q68G75 181 aa15.07■□□□□ 0
PTCD3-202ENST00000409326 SBSPONQ8IVN8 264 aa15.07■□□□□ 0
PTCD3-202ENST00000409326 OR1L4Q8NGR5 311 aa15.07■□□□□ 0
PTCD3-202ENST00000409326 PFDN5Q99471 154 aa15.07■□□□□ 0
PTCD3-202ENST00000409326 ASCL2Q99929 193 aa15.07■□□□□ 0
PTCD3-202ENST00000409326 RNF24Q9Y225 148 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 1254.2 ms