RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 FABP1P07148 127 aa10.72□□□□□ -0.69
CHRNA1-204ENST00000409323 IGLL1P15814 213 aa10.72□□□□□ -0.69
CHRNA1-204ENST00000409323 LEMD1Q68G75 181 aa10.72□□□□□ -0.69
CHRNA1-204ENST00000409323 REC114Q7Z4M0 266 aa10.72□□□□□ -0.69
CHRNA1-204ENST00000409323 ZNF709Q8N972 641 aa10.72□□□□□ -0.69
CHRNA1-204ENST00000409323 SLC39A9Q9NUM3 307 aa10.72□□□□□ -0.69
CHRNA1-204ENST00000409323 SEC14L6B5MCN3 397 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 LGALS9O00182 355 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 SAP30O75446 220 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 CSN3P07498 182 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 FOLR2P14207 255 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 PRR20EP86478 221 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 PRR20CP86479 221 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 PRR20DP86480 221 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 PRR20BP86481 221 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 PRR20AP86496 221 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 FFAR4Q5NUL3 377 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 PATE2Q6UY27 113 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 SLC7A5P1Q8MH63 180 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 RNF141Q8WVD5 230 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 ELOVL1Q9BW60 279 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 VSIRQ9H7M9 311 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 DAZ1Q9NQZ3 744 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 PLA2G2EQ9NZK7 142 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 UFC1Q9Y3C8 167 aa10.71□□□□□ -0.69
CHRNA1-204ENST00000409323 ATP6V1G1O75348 118 aa10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 MPDU1O75352 247 aa10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 CBLN1P23435 193 aa10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 RPL29P47914 159 aaKnown RBP10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 SULT1A2P50226 295 aa10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 MORN5Q5VZ52 161 aa10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 SAT2Q96F10 170 aaPredicted RBP10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 METTL26Q96S19 204 aa10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 PEMTQ9UBM1 199 aa10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 RABAC1Q9UI14 185 aa10.7□□□□□ -0.7
CHRNA1-204ENST00000409323 IGKV3-7A0A075B6H7 116 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 A8MWP6 167 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 C17orf112F2Z3M2 114 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 NPPCP23582 126 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 SELENOTP62341 195 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 TMED6Q8WW62 240 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 TMEM37Q8WXS4 190 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 SCRT1Q9BWW7 348 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 SLC25A22Q9H936 323 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 MLXQ9UH92 298 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 IGHV7-4-1A0A0J9YVY3 117 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 COX7A2P2O60397 106 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 HYPMO75409 117 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 RAB5CP51148 216 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 OXLD1Q5BKU9 147 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 SPATA31B1PQ5VZV4 182 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 Q6ZRG5 221 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 LYPD6BQ8NI32 183 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 GNPNAT1Q96EK6 184 aaPredicted RBP10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 RHPN1-AS1Q9BWJ2 59 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 HIGD1AQ9Y241 93 aa10.69□□□□□ -0.7
CHRNA1-204ENST00000409323 TRAV5A0A0B4J249 113 aa10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 CHEK1O14757 476 aa10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 SNRPCP09234 159 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 CRYBB3P26998 211 aa10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 RAB2AP61019 212 aa10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 FAM74A1Q5RGS3 127 aa10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 EIF4E3Q8N5X7 224 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 OR2G3Q8NGZ4 309 aa10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 DYNLRB2Q8TF09 96 aa10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 RNF2Q99496 336 aa10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 MRPL27Q9P0M9 148 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 SMPXQ9UHP9 88 aa10.68□□□□□ -0.7
CHRNA1-204ENST00000409323 IZUMO1RA6ND01 250 aa10.67□□□□□ -0.7
CHRNA1-204ENST00000409323 K7EMT4 169 aa10.67□□□□□ -0.7
CHRNA1-204ENST00000409323 C10orf113Q5VZT2 155 aa10.67□□□□□ -0.7
CHRNA1-204ENST00000409323 LINC00305Q7Z4B0 112 aa10.67□□□□□ -0.7
CHRNA1-204ENST00000409323 PSMG3Q9BT73 122 aaPredicted RBP10.67□□□□□ -0.7
CHRNA1-204ENST00000409323 SLC25A39Q9BZJ4 359 aaPredicted RBP10.67□□□□□ -0.7
CHRNA1-204ENST00000409323 ANK2Q01484 3957 aa10.67□□□□□ -0.7
CHRNA1-204ENST00000409323 UMAD1C9J7I0 102 aa10.66□□□□□ -0.7
CHRNA1-204ENST00000409323 HMGB3O15347 200 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-204ENST00000409323 PLP1P60201 277 aa10.66□□□□□ -0.7
CHRNA1-204ENST00000409323 CD300EQ496F6 205 aaPredicted RBP10.66□□□□□ -0.7
CHRNA1-204ENST00000409323 WFDC9Q8NEX5 89 aa10.66□□□□□ -0.7
CHRNA1-204ENST00000409323 SEPSECSQ9HD40 501 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-204ENST00000409323 DNAJC4Q9NNZ3 241 aa10.66□□□□□ -0.7
CHRNA1-204ENST00000409323 TIMM9Q9Y5J7 89 aa10.66□□□□□ -0.7
CHRNA1-204ENST00000409323 ZNF98A6NK75 572 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 H3BRN7 92 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 C8orf88P0DMB2 117 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 SERF2P84101 59 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 PRR31Q5SQ13 230 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 FAM78BQ5VT40 261 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 FAM122CQ6P4D5 195 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 MIR17HGQ75NE6 70 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 GBGT1Q8N5D6 347 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 KCNIP2Q9NS61 270 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 U3KQE9 123 aa10.65□□□□□ -0.7
CHRNA1-204ENST00000409323 G3V4G9 280 aa10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 BUB3O43684 328 aa10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 S100A1P23297 94 aa10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 TFPI2P48307 235 aa10.65□□□□□ -0.71
CHRNA1-204ENST00000409323 BLOC1S1P78537 153 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms