RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ALKBH6Q3KRA9 238 aa10.3□□□□□ -0.76
HERC3-203ENST00000407637 Q71RC1 249 aaPredicted RBP10.3□□□□□ -0.76
HERC3-203ENST00000407637 WFDC3Q8IUB2 231 aa10.3□□□□□ -0.76
HERC3-203ENST00000407637 ZNF492Q9P255 531 aa10.3□□□□□ -0.76
HERC3-203ENST00000407637 MYCNOSP40205 109 aa10.3□□□□□ -0.76
HERC3-203ENST00000407637 SSR4P51571 173 aa10.3□□□□□ -0.76
HERC3-203ENST00000407637 XGP55808 180 aa10.3□□□□□ -0.76
HERC3-203ENST00000407637 HERV-K104P63124 156 aa10.3□□□□□ -0.76
HERC3-203ENST00000407637 C1orf229Q6ZS94 237 aaPredicted RBP10.3□□□□□ -0.76
HERC3-203ENST00000407637 PGPA6NDG6 321 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 C15orf65H3BRN8 121 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 ZNF766Q5HY98 468 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 C10orf113Q5VZT2 155 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 PDPNQ86YL7 162 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 OR5AN1Q8NGI8 311 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 CCL5P13501 91 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 COL8A1P27658 744 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 CFHR2P36980 270 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 Q6ZUT4 128 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 ANAPC13Q9BS18 74 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 KLF12Q9Y4X4 402 aa10.29□□□□□ -0.76
HERC3-203ENST00000407637 B5MCH6 92 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 C5orf67F2Z3F1 127 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 OVOL3O00110 214 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 LAMTOR5O43504 91 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 ZNF134P52741 427 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 KLRD1Q13241 179 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 CEND1Q8N111 149 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 GLMPQ8WWB7 406 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 IFI27L2Q9H2X8 130 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 HIGD1BQ9P298 99 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 ARFGEF3Q5TH69 2177 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 A0A1B0GUT8 65 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 PRRG2O14669 202 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 FOXI1Q12951 378 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 UTF1Q5T230 341 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 TMEM178AQ8NBL3 297 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 IFI27L1Q96BM0 104 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 ZNF714Q96N38 554 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 DNAJC13O75165 2243 aa10.28□□□□□ -0.76
HERC3-203ENST00000407637 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.76
HERC3-203ENST00000407637 H3BTX0 84 aa10.27□□□□□ -0.76
HERC3-203ENST00000407637 SRYQ05066 204 aa10.27□□□□□ -0.76
HERC3-203ENST00000407637 TUSC5Q8IXB3 177 aa10.27□□□□□ -0.76
HERC3-203ENST00000407637 CIARTQ8N365 385 aaPredicted RBP10.27□□□□□ -0.76
HERC3-203ENST00000407637 LEAP2Q969E1 77 aa10.27□□□□□ -0.76
HERC3-203ENST00000407637 TM2D2Q9BX73 214 aa10.27□□□□□ -0.76
HERC3-203ENST00000407637 PI4KAP42356 2102 aa10.27□□□□□ -0.77
HERC3-203ENST00000407637 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.77
HERC3-203ENST00000407637 A0A1W2PR77 199 aa10.27□□□□□ -0.77
HERC3-203ENST00000407637 Q6ZS52 159 aa10.27□□□□□ -0.77
HERC3-203ENST00000407637 PRUNE2Q8WUY3 3088 aa10.27□□□□□ -0.77
HERC3-203ENST00000407637 TRAV8-1A0A0A6YYK1 113 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 D6R8Y8 96 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 TNFRSF13BO14836 293 aaPredicted RBP10.26□□□□□ -0.77
HERC3-203ENST00000407637 LINC01565O15544 149 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 IGHV3-48P01763 117 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 HBDP02042 147 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 CD69Q07108 199 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 GAGE5Q13069 117 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 GAGE6Q13070 117 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 RPS19BP1Q86WX3 136 aaKnown RBP10.26□□□□□ -0.77
HERC3-203ENST00000407637 FAM90A1Q86YD7 464 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 FMC1Q96HJ9 113 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 TPPP3Q9BW30 176 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 C1QTNF4Q9BXJ3 329 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 PRNDQ9UKY0 176 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 KIAA0100Q14667 2235 aaKnown RBP10.26□□□□□ -0.77
HERC3-203ENST00000407637 CYB561P49447 251 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 PRCDQ00LT1 54 aa10.26□□□□□ -0.77
HERC3-203ENST00000407637 RALYQ9UKM9 306 aaKnown RBP10.26□□□□□ -0.77
HERC3-203ENST00000407637 FSTL3O95633 263 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 CT45A10P0DMU9 189 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 RNASE2P10153 161 aaKnown RBP10.25□□□□□ -0.77
HERC3-203ENST00000407637 KIR2DS2P43631 304 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 LINC00305Q7Z4B0 112 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 FAM169BQ8N8A8 192 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 SRSF8Q9BRL6 282 aaKnown RBP10.25□□□□□ -0.77
HERC3-203ENST00000407637 UFC1Q9Y3C8 167 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 hADV38S2A0JD32 116 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 NPIPB5A8MRT5 1133 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 CNIH1O95406 144 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 CRYGCP07315 174 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 C12orf74Q32Q52 190 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 NFE4Q86UQ8 179 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 OR1L4Q8NGR5 311 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 ZNF296Q8WUU4 475 aaPredicted RBP10.25□□□□□ -0.77
HERC3-203ENST00000407637 FZR1Q9UM11 496 aa10.25□□□□□ -0.77
HERC3-203ENST00000407637 IGHV1-45A0A0A0MS14 117 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 NDUFS7O75251 213 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 IGLV3-19P01714 112 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 RIGQ13278 110 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 C2orf83Q53S99 150 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 SRSF12Q8WXF0 261 aaKnown RBP10.24□□□□□ -0.77
HERC3-203ENST00000407637 FLYWCH2Q96CP2 140 aaKnown RBP10.24□□□□□ -0.77
HERC3-203ENST00000407637 PRELID3AQ96N28 172 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 FAM110AQ9BQ89 295 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 WI2-2373I1.2A0A1W2PRP0 233 aa10.24□□□□□ -0.77
HERC3-203ENST00000407637 TCRAP04437 139 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms