RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 H3BMM0 161 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 HNRNPCP07910 306 aaKnown RBP eCLIP8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 RND2P52198 227 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 C16orf54Q6UWD8 224 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 ZNF705AQ6ZN79 300 aaPredicted RBP8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 RNASEH2CQ8TDP1 164 aaKnown RBP8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 DTD1Q8TEA8 209 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 Q8WTZ3 238 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 NIPSNAP3BQ9BS92 247 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 NDUFA13Q9P0J0 144 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 TMED3Q9Y3Q3 217 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 RFNGQ9Y644 331 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 U3KQE9 123 aa8.77□□□□□ -1.01
APOBEC3B-204ENST00000407298 LINC00854A0A1B0GVQ3 168 aa8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 NAP1L6A6NFF2 107 aa8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 EMP1P54849 157 aa8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 UBE2MP61081 183 aaKnown RBP8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 OXA1LQ15070 435 aa8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 MAPKAPK5-AS1Q8N8E1 139 aa8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 OR1S1Q8NH92 325 aa8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 SCRT1Q9BWW7 348 aa8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 NRN1Q9NPD7 142 aa8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 CACFD1Q9UGQ2 172 aa8.76□□□□□ -1.01
APOBEC3B-204ENST00000407298 C9orf170A2RU37 121 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 ZNF705FA8MVS1 300 aaPredicted RBP8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 FAM90A26D6RGX4 464 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 PLA2G10O15496 165 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 ZNF705DP0CH99 300 aaPredicted RBP8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 ZNF705BP0CI00 300 aaPredicted RBP8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 SLC25A4P12235 298 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 SLC25A6P12236 298 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 HLA-DRB4P13762 266 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 NKX2-1P43699 371 aaPredicted RBP8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 OR1S2Q8NGQ3 325 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 GLMPQ8WWB7 406 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 DKK2Q9UBU2 259 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 PFDN2Q9UHV9 154 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 U3KQ87 197 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 HLA-DRB4X5D2U9 266 aa8.75□□□□□ -1.01
APOBEC3B-204ENST00000407298 ADAP1O75689 374 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 HOXB5P09067 269 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 IAPPP10997 89 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 ANXA7P20073 488 aaKnown RBP8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 OR10J1P30954 320 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 YPEL3P61236 119 aaPredicted RBP8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 FAM222AQ5U5X8 452 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 GGNBP1Q5YKI7 109 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 NPIPB3Q92617 1050 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 C7orf50Q9BRJ6 194 aaKnown RBP8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 ATG101Q9BSB4 218 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 HSPG2P98160 4391 aa8.74□□□□□ -1.01
APOBEC3B-204ENST00000407298 IGKV1D-37A0A075B6S9 117 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 IGHV3OR16-12A0A075B7B8 117 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 PIGBOS1A0A0B4J2F0 54 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 PRSS46E5RG02 174 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 OR4E1P0C645 316 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 HTN3P15516 51 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 NUP62P37198 522 aaPredicted RBP8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 ID1P41134 155 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 INPP1P49441 399 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 SPATA31B1PQ5VZV4 182 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 SIGLEC15Q6ZMC9 328 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 ACY3Q96HD9 319 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 CLUHP3Q96NS8 147 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 MAGT1Q9H0U3 335 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 GOLT1BQ9Y3E0 138 aa8.73□□□□□ -1.01
APOBEC3B-204ENST00000407298 A6NHS1 94 aa8.72□□□□□ -1.01
APOBEC3B-204ENST00000407298 HBE1P02100 147 aa8.72□□□□□ -1.01
APOBEC3B-204ENST00000407298 DAD1P61803 113 aa8.72□□□□□ -1.01
APOBEC3B-204ENST00000407298 GAMTQ14353 236 aa8.72□□□□□ -1.01
APOBEC3B-204ENST00000407298 ETFRF1Q6IPR1 90 aa8.72□□□□□ -1.01
APOBEC3B-204ENST00000407298 GSG1LQ6UXU4 331 aa8.72□□□□□ -1.01
APOBEC3B-204ENST00000407298 IGKV1OR2-108A0A075B7D4 117 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 LYRM1O43325 122 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 BUB3O43684 328 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 SYNGR2O43760 224 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 TOMM40O96008 361 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 IL4P05112 153 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 RD3LP0DJH9 198 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 ATP5IP56385 69 aaPredicted RBP8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 CNPY1Q3B7I2 92 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 LCE2CQ5TA81 110 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 TMEM88Q6PEY1 159 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 FOXI2Q6ZQN5 318 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 NOXA1Q86UR1 476 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 Q8N1X5 172 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 C6orf223Q8N319 242 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 OR4D5Q8NGN0 318 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 C20orf85Q9H1P6 137 aa8.71□□□□□ -1.02
APOBEC3B-204ENST00000407298 LOC102723971A0A1B0GUV8 181 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 CENPXA8MT69 81 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 IGKV3-20P01619 116 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 PSG1P11464 419 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 GPX4P36969 197 aaPredicted RBP8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 ID3Q02535 119 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 ZNF90Q03938 601 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 TNP2Q05952 138 aa8.7□□□□□ -1.02
APOBEC3B-204ENST00000407298 RRN3P1Q2M238 152 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms