RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 AGPAT2O15120 278 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 C8orf88P0DMB2 117 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 FGF7P21781 194 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 ZNF266Q14584 549 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 Q5BKY6 102 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 PXDC1Q5TGL8 231 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 IL34Q6ZMJ4 242 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 RBPMS2Q6ZRY4 209 aaKnown RBP7.99□□□□□ -1.13
RPAIN-204ENST00000405578 ASCL2Q99929 193 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 RHPN1-AS1Q9BWJ2 59 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 SMIM3Q9BZL3 60 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 SMPXQ9UHP9 88 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 SLC45A2Q9UMX9 530 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 TNFSF18Q9UNG2 199 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 WDR83OSQ9Y284 106 aa7.99□□□□□ -1.13
RPAIN-204ENST00000405578 LSM4Q9Y4Z0 139 aaKnown RBP7.99□□□□□ -1.13
RPAIN-204ENST00000405578 TRAV25A0A0B4J276 109 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 ARPC5O15511 151 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 HYPMO75409 117 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 IGLV1-51P01701 117 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 LINC00869P0C866 280 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 ORM2P19652 201 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 CRYBB3P26998 211 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 PAFAH1B2P68402 229 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 DEFB114Q30KQ6 69 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 TCTE3Q8IZS6 198 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 OR1B1Q8NGR6 318 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 MGST2Q99735 147 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 MFFQ9GZY8 342 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 FBXL17Q9UF56 701 aa7.98□□□□□ -1.13
RPAIN-204ENST00000405578 ELOA3CA0A087WX78 387 aaPredicted RBP7.97□□□□□ -1.13
RPAIN-204ENST00000405578 BORCS7-ASMTA0A0B4J1R7 106 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 HELTA6NFD8 242 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 HMSDA8MTL9 139 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 SMLR1H3BR10 107 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 CHEK1O14757 476 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 TAAR5O14804 337 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 COX7A2P2O60397 106 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 OR5G3P0C626 314 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 RPL29P47914 159 aaKnown RBP7.97□□□□□ -1.13
RPAIN-204ENST00000405578 RPL11P62913 178 aaKnown RBP7.97□□□□□ -1.13
RPAIN-204ENST00000405578 USF2Q15853 346 aaPredicted RBP7.97□□□□□ -1.13
RPAIN-204ENST00000405578 CD300EQ496F6 205 aaPredicted RBP7.97□□□□□ -1.13
RPAIN-204ENST00000405578 OR1L4Q8NGR5 311 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 NPCDR1Q9BY65 106 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 WDR61Q9GZS3 305 aaKnown RBP7.97□□□□□ -1.13
RPAIN-204ENST00000405578 ARL6Q9H0F7 186 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 HIGD1AQ9Y241 93 aa7.97□□□□□ -1.13
RPAIN-204ENST00000405578 IGHV3-49A0A0A0MS15 119 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 GATA2P23769 480 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-204ENST00000405578 B2MP61769 119 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 GUCA2BQ16661 112 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 C1orf194Q5T5A4 169 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 ADAMTSL5Q6ZMM2 481 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 STPG3Q8N7X2 389 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 ST8SIA2Q92186 375 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 ST6GAL2Q96JF0 529 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 PFDN5Q99471 154 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 GGTLC1Q9BX51 225 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 PARD6GQ9BYG4 376 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-204ENST00000405578 VSIRQ9H7M9 311 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 SLC39A9Q9NUM3 307 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 DOK5Q9P104 306 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 MLXQ9UH92 298 aa7.96□□□□□ -1.14
RPAIN-204ENST00000405578 ZNF256Q9Y2P7 627 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-204ENST00000405578 IGHV3OR16-13A0A075B7E8 117 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 IGHV3-74A0A0B4J1X5 117 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 IGHV3-66A0A0C4DH42 116 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 A0A0D9SG52 128 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 RNF222A6NCQ9 220 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 OR4C46A6NHA9 309 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 G3V3Q6 166 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 PLP1P60201 277 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 ZNF345Q14585 488 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 OPCMLQ14982 345 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 MIC13Q5XKP0 118 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 ZFAND6Q6FIF0 208 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 TCF24Q7RTU0 167 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 GTSCR1Q86UQ5 136 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 OR8I2Q8N0Y5 310 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 ZNF414Q96IQ9 312 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 HYLS1Q96M11 299 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 GPR82Q96P67 336 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 RNF2Q99496 336 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 SPAG8Q99932 426 aaPredicted RBP7.95□□□□□ -1.14
RPAIN-204ENST00000405578 NEURL2Q9BR09 285 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 ARV1Q9H2C2 271 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 DNAJC4Q9NNZ3 241 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 PXMP4Q9Y6I8 212 aa7.95□□□□□ -1.14
RPAIN-204ENST00000405578 KANTRA0A1W2PQU2 76 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 DNASE2O00115 360 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-204ENST00000405578 TSPAN4O14817 238 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 BUB3O43684 328 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 JTBO76095 146 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 C1QBP02746 253 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 GP9P14770 177 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 EDN2P20800 178 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 C4BPBP20851 252 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 EIF5AP63241 154 aaKnown RBP7.94□□□□□ -1.14
RPAIN-204ENST00000405578 PRR20EP86478 221 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms