RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 TBC1D24Q9ULP9 559 aa6.2□□□□□ -1.42
USP16-202ENST00000399973 TP53TG1Q9Y2A0 90 aa6.2□□□□□ -1.42
USP16-202ENST00000399973 RCL1Q9Y2P8 373 aaKnown RBP6.2□□□□□ -1.42
USP16-202ENST00000399973 U3KQE9 123 aa6.2□□□□□ -1.42
USP16-202ENST00000399973 STARD9Q9P2P6 4700 aa6.2□□□□□ -1.42
USP16-202ENST00000399973 CXorf65A6NEN9 183 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 UPK1BO75841 260 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 MBPP02686 304 aaPredicted RBP6.19□□□□□ -1.42
USP16-202ENST00000399973 ORM2P19652 201 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 BCAP31P51572 246 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 SNRPD3P62318 126 aaKnown RBP6.19□□□□□ -1.42
USP16-202ENST00000399973 ASAH1Q13510 395 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
USP16-202ENST00000399973 GSG1LQ6UXU4 331 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 LINC00299Q6ZSB3 139 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 OR8I2Q8N0Y5 310 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 C12orf45Q8N5I9 185 aaPredicted RBP6.19□□□□□ -1.42
USP16-202ENST00000399973 OR1B1Q8NGR6 318 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 RNF183Q96D59 192 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 SMIM8Q96KF7 97 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 RAB40CQ96S21 281 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 FBXL17Q9UF56 701 aa6.19□□□□□ -1.42
USP16-202ENST00000399973 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
USP16-202ENST00000399973 TSC22D2O75157 780 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 CFDP00746 253 aaPredicted RBP6.18□□□□□ -1.42
USP16-202ENST00000399973 IL5P05113 134 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 LINC00869P0C866 280 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 CAV2P51636 162 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 PAX9P55771 341 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 DLK1P80370 383 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 SLC38A11Q08AI6 406 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 TMEM14EPQ6UXP3 125 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 CYP2G1PQ6ZSU1 146 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 TRPT1Q86TN4 253 aaKnown RBP6.18□□□□□ -1.42
USP16-202ENST00000399973 OR10P1Q8NGE3 313 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 LINC00052Q96N35 136 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 TMEM147Q9BVK8 224 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 SCRT1Q9BWW7 348 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 GPN1Q9HCN4 374 aaPredicted RBP6.18□□□□□ -1.42
USP16-202ENST00000399973 RYR2Q92736 4967 aa6.18□□□□□ -1.42
USP16-202ENST00000399973 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 C7orf66A4D0T2 115 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 K7EPK0 472 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 GOSR2O14653 212 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 IGKV3-20P01619 116 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 OR5G3P0C626 314 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 PVALBP20472 110 aaPredicted RBP6.17□□□□□ -1.42
USP16-202ENST00000399973 C4BPBP20851 252 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 ID1P41134 155 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 TAS2R30P59541 319 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 DEFB1P60022 68 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 RAP2BP61225 183 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 EWSR1Q01844 656 aaKnown RBP eCLIP6.17□□□□□ -1.42
USP16-202ENST00000399973 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 TMEM182Q6ZP80 229 aaPredicted RBP6.17□□□□□ -1.42
USP16-202ENST00000399973 TMEM144Q7Z5S9 345 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 TMEM217Q8N7C4 229 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 OR11H2Q8NH07 326 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 GATAD1Q8WUU5 269 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 RARRES2Q99969 163 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 SLC25A32Q9H2D1 315 aa6.17□□□□□ -1.42
USP16-202ENST00000399973 PMS2P5A8MQ11 134 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 DEFB4AO15263 64 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 CST7O76096 145 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 SPP1P10451 314 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 ATF4P18848 351 aaPredicted RBP6.16□□□□□ -1.42
USP16-202ENST00000399973 GALR1P47211 349 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 PSMB3P49720 205 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 DEFA1P59665 94 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 DEFA3P59666 94 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 IFITM3Q01628 133 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 FGL1Q08830 312 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 C1orf194Q5T5A4 169 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 MORN3Q6PF18 240 aaPredicted RBP6.16□□□□□ -1.42
USP16-202ENST00000399973 TEPPQ6URK8 271 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 NRARPQ7Z6K4 114 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 ZNF546Q86UE3 836 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 C16orf92Q96LL3 132 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 C2orf50Q96LR7 162 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 UHRF2Q96PU4 802 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 ARL6Q9H0F7 186 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 BATF3Q9NR55 127 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 CLEC5AQ9NY25 188 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 HIGD1AQ9Y241 93 aa6.16□□□□□ -1.42
USP16-202ENST00000399973 CSMD3Q7Z407 3707 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 LCE6AA0A183 80 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 UBE2L5PA0A1B0GUS4 154 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 FAM24AA6NFZ4 105 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 ZNF98A6NK75 572 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 H3BRN7 92 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 JTBO76095 146 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 SIX6O95475 246 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 S100A7P31151 101 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 MEOX2P50222 304 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 FXYD7P58549 80 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 SELENOTP62341 195 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 ARL16Q0P5N6 197 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 RAB32Q13637 225 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 LRRC37A5PQ49AS3 106 aa6.15□□□□□ -1.42
USP16-202ENST00000399973 GDF5OSQ5U4N7 250 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms