RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 ZFP36P26651 326 aaKnown RBP9.39□□□□□ -0.91
COL25A1-202ENST00000399127 GPR6P46095 362 aaPredicted RBP9.39□□□□□ -0.91
COL25A1-202ENST00000399127 VAMP3Q15836 100 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 PRR27Q6MZM9 219 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 Q6ZWC4 215 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 VN1R17PQ8TDU5 208 aa9.39□□□□□ -0.91
COL25A1-202ENST00000399127 A0A0U1RQK1 487 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 COX7A2P2O60397 106 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 PSG1P11464 419 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 OCC1Q8TAD7 63 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 SRSF12Q8WXF0 261 aaKnown RBP9.38□□□□□ -0.91
COL25A1-202ENST00000399127 DPM3Q9P2X0 92 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 CENPEQ02224 2701 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 CSMD2Q7Z408 3487 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 TCRBV4S1A1TA0A5B7 111 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 PSMB11A5LHX3 300 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 TEX22C9J3V5 150 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 CNIH1O95406 144 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 PYYP10082 97 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 CRYBB3P26998 211 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 HNRNPA3P51991 378 aaKnown RBP9.38□□□□□ -0.91
COL25A1-202ENST00000399127 LCN2P80188 198 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 HES1Q14469 280 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 PATE2Q6UY27 113 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 OR5AU1Q8NGC0 362 aa9.38□□□□□ -0.91
COL25A1-202ENST00000399127 FAM103A1Q9BTL3 118 aaKnown RBP9.38□□□□□ -0.91
COL25A1-202ENST00000399127 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 C8orf88P0DMB2 117 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 ORM2P19652 201 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 HINT1P49773 126 aaPredicted RBP9.37□□□□□ -0.91
COL25A1-202ENST00000399127 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
COL25A1-202ENST00000399127 C10orf113Q5VZT2 155 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 Q6ZN92 141 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 IMMP2LQ96T52 175 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 TXN2Q99757 166 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 TXNDC17Q9BRA2 123 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 SLC25A2Q9BXI2 301 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 TNFRSF19Q9NS68 423 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 TAS2R45P59539 299 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 SUMO1P63165 101 aaKnown RBP9.37□□□□□ -0.91
COL25A1-202ENST00000399127 UBE2L3P68036 154 aaKnown RBP9.37□□□□□ -0.91
COL25A1-202ENST00000399127 PQLC2Q6ZP29 291 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 VMO1Q7Z5L0 202 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 OR11H6Q8NGC7 330 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 FAM167A-AS1Q96KT0 104 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 TMEM167BQ9NRX6 74 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 ZNF355PQ9NSJ1 428 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 UQCR10Q9UDW1 63 aa9.37□□□□□ -0.91
COL25A1-202ENST00000399127 TRAV34A0A0B4J273 112 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 K7EN84 100 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 RHOGP84095 191 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 DYNAPQ8N1N2 210 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 OR1B1Q8NGR6 318 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 SERTM2A0A1B0GWG4 89 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 PRTN3P24158 256 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 THAP8Q8NA92 274 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 OR4B1Q8NGF8 309 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 CFHR4Q92496 578 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 C19orf24Q9BVV8 132 aa9.36□□□□□ -0.91
COL25A1-202ENST00000399127 MDFIC2A0A1B0GVS7 189 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 M0R1W7 72 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 SCGB2A2Q13296 93 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 ERASQ7Z444 233 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 OR2T10Q8NGZ9 312 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 F11RQ9Y624 299 aaKnown RBP9.35□□□□□ -0.91
COL25A1-202ENST00000399127 ODF3BA8MYP8 253 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 HYPMO75409 117 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 CEACAM3P40198 252 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 CTRLP40313 264 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 CMTM2Q8TAZ6 248 aa9.35□□□□□ -0.91
COL25A1-202ENST00000399127 MRPL32Q9BYC8 188 aaKnown RBP9.35□□□□□ -0.91
COL25A1-202ENST00000399127 A1L4Q6 167 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 HELTA6NFD8 242 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 CORTO00230 105 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 SLC17A3O00476 420 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 NBR2O15453 112 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 CRYGCP07315 174 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 SPATA45Q537H7 98 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 CENPWQ5EE01 88 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 KLF17Q5JT82 389 aaPredicted RBP9.34□□□□□ -0.91
COL25A1-202ENST00000399127 SGMS2Q8NHU3 365 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 C11orf52Q96A22 123 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 EAF1Q96JC9 268 aaPredicted RBP9.34□□□□□ -0.91
COL25A1-202ENST00000399127 WNT10AQ9GZT5 417 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 S4R3C0 116 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 DOPEY1Q5JWR5 2465 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 EPG5Q9HCE0 2579 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 IGLC2P0DOY2 106 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 IGLC3P0DOY3 106 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 ASPHD1Q5U4P2 390 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 OR1L4Q8NGR5 311 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 LINC00479Q96M42 142 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 HSPB9Q9BQS6 159 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 PAXXQ9BUH6 204 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 BPESC1Q9GZL8 116 aa9.34□□□□□ -0.91
COL25A1-202ENST00000399127 NCBP2LA6PVI3 153 aaKnown RBP9.33□□□□□ -0.92
COL25A1-202ENST00000399127 H3BTX0 84 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms