RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 GATA2P23769 480 aaPredicted RBP12.04□□□□□ -0.48
COL25A1-201ENST00000399126 UBE2E1P51965 193 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 FAM120AOSQ5T036 256 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 LFNGQ8NES3 379 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 MBD3L1Q8WWY6 194 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 MRPL36Q9P0J6 103 aaKnown RBP12.04□□□□□ -0.48
COL25A1-201ENST00000399126 KIAA1456Q9P272 454 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 GNG13Q9P2W3 67 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 RBFOX3A6NFN3 312 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 C17orf112F2Z3M2 114 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 RPS20P60866 119 aaKnown RBP12.04□□□□□ -0.48
COL25A1-201ENST00000399126 TEPPQ6URK8 271 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 FAM103A1Q9BTL3 118 aaKnown RBP12.04□□□□□ -0.48
COL25A1-201ENST00000399126 GCN1Q92616 2671 aaKnown RBP12.04□□□□□ -0.48
COL25A1-201ENST00000399126 CENPVL3A0A0U1RRI6 287 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 ZFP92A6NM28 416 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 INS-IGF2F8WCM5 200 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 NBR2O15453 112 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 OR5G3P0C626 314 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 CD69Q07108 199 aa12.04□□□□□ -0.48
COL25A1-201ENST00000399126 SRSF12Q8WXF0 261 aaKnown RBP12.04□□□□□ -0.48
COL25A1-201ENST00000399126 IGHV3-21A0A0B4J1V1 117 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 TRAV1-1A0A0B4J248 108 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 ICAM4Q14773 271 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 ZNF738Q8NE65 137 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 OR4X1Q8NH49 305 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 ACY3Q96HD9 319 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 CST9LQ9H4G1 147 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 SLC39A9Q9NUM3 307 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 SMPXQ9UHP9 88 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 CCDC168Q8NDH2 2452 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 TEX15Q9BXT5 2789 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 CREBBPQ92793 2442 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 MPDU1O75352 247 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 OPRK1P41145 380 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 PAX8Q06710 450 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 MINOS1Q5TGZ0 78 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 HIST2H2BCQ6DN03 193 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 STPG3Q8N7X2 389 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 TMEM116Q8NCL8 245 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 MINOS1-NBL1R4GNA1 71 aa12.03□□□□□ -0.48
COL25A1-201ENST00000399126 ZNF705FA8MVS1 300 aaPredicted RBP12.02□□□□□ -0.49
COL25A1-201ENST00000399126 HBE1P02100 147 aa12.02□□□□□ -0.49
COL25A1-201ENST00000399126 ZNF705DP0CH99 300 aaPredicted RBP12.02□□□□□ -0.49
COL25A1-201ENST00000399126 ZNF705BP0CI00 300 aaPredicted RBP12.02□□□□□ -0.49
COL25A1-201ENST00000399126 BRD3OSQ6XYD6 125 aa12.02□□□□□ -0.49
COL25A1-201ENST00000399126 MAPK1IP1LQ8NDC0 245 aa12.02□□□□□ -0.49
COL25A1-201ENST00000399126 GATAD1Q8WUU5 269 aa12.02□□□□□ -0.49
COL25A1-201ENST00000399126 RNF5Q99942 180 aa12.02□□□□□ -0.49
COL25A1-201ENST00000399126 ITPR2Q14571 2701 aa12.02□□□□□ -0.49
COL25A1-201ENST00000399126 TRBV7-9A0A0J9YWB2 115 aa12.02□□□□□ -0.49
COL25A1-201ENST00000399126 CLEC12BQ2HXU8 276 aa12.02□□□□□ -0.49
COL25A1-201ENST00000399126 CCDC144NLQ6NUI1 221 aa12.02□□□□□ -0.49
COL25A1-201ENST00000399126 SOX21Q9Y651 276 aaPredicted RBP12.02□□□□□ -0.49
COL25A1-201ENST00000399126 CTXND1A0A1B0GTU2 59 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 NCBP2LA6PVI3 153 aaKnown RBP12.01□□□□□ -0.49
COL25A1-201ENST00000399126 K7ERU9 68 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 NDUFA3O95167 84 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 CNIH1O95406 144 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 NPBQ8NG41 125 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 OR2T10Q8NGZ9 312 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 MXRA5Q9NR99 2828 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 TRAV40A0A0B4J280 105 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 NPFFO15130 113 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 ACOT6Q3I5F7 207 aaPredicted RBP12.01□□□□□ -0.49
COL25A1-201ENST00000399126 SPATA31B1PQ5VZV4 182 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 TMEM144Q7Z5S9 345 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 Q8N6K4 173 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 TVP23CQ96ET8 276 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 COX11Q9Y6N1 276 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 TLN2Q9Y4G6 2542 aa12.01□□□□□ -0.49
COL25A1-201ENST00000399126 TRBV24-1A0A075B6N3 115 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 RND2P52198 227 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 NDPQ00604 133 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 TRAV30A0A087WSZ9 112 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 LOC102723971A0A1B0GUV8 181 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 A0A1B0GV72 72 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 B4DEV8 164 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 LINC00869P0C866 280 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 IGHV4-38-2P0DP08 117 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 PRR20EP86478 221 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 PRR20CP86479 221 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 PRR20DP86480 221 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 PRR20BP86481 221 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 PRR20AP86496 221 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 ZNF506Q5JVG8 444 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 STPG4Q8N801 248 aa12□□□□□ -0.49
COL25A1-201ENST00000399126 TRAV26-1A0A087WT03 109 aa11.99□□□□□ -0.49
COL25A1-201ENST00000399126 WIPF1O43516 503 aa11.99□□□□□ -0.49
COL25A1-201ENST00000399126 CYB561D1Q8N8Q1 229 aa11.99□□□□□ -0.49
COL25A1-201ENST00000399126 NPIPB3Q92617 1050 aa11.99□□□□□ -0.49
COL25A1-201ENST00000399126 SLC45A2Q9UMX9 530 aa11.99□□□□□ -0.49
COL25A1-201ENST00000399126 OOSP1A8MZH6 123 aa11.99□□□□□ -0.49
COL25A1-201ENST00000399126 FNDC10F2Z333 226 aa11.99□□□□□ -0.49
COL25A1-201ENST00000399126 SRP19P09132 144 aaKnown RBP11.99□□□□□ -0.49
COL25A1-201ENST00000399126 BCL2P10415 239 aa11.99□□□□□ -0.49
COL25A1-201ENST00000399126 SUB1P53999 127 aaKnown RBP eCLIP11.99□□□□□ -0.49
COL25A1-201ENST00000399126 FXYD3Q14802 87 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms