RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 FOXG1P55316 489 aaPredicted RBP9.69□□□□□ -0.86
TMF1-201ENST00000398559 EFNA2O43921 213 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 TMEM200BQ69YZ2 307 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 LCTP09848 1927 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 TRAV8-1A0A0A6YYK1 113 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.69□□□□□ -0.86
TMF1-201ENST00000398559 OCIAD2Q56VL3 154 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 C1orf122Q6ZSJ8 110 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 DOCK3Q8IZD9 2030 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 SYS1-DBNDD2H3BUS1 97 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 C3orf36Q3SXR2 165 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
TMF1-201ENST00000398559 PSPNO60542 156 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 KIR3DS1Q14943 382 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 C15orf32Q32M92 178 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 ZNF664Q8N3J9 261 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 TNFRSF14Q92956 283 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 GTSF1LQ9H1H1 148 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 TRGV9Q99603 122 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 RPUSD1Q9UJJ7 312 aaKnown RBP9.68□□□□□ -0.86
TMF1-201ENST00000398559 TOMM40O96008 361 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 NTF4P34130 210 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 ZNF138P52744 262 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 ZNF876PQ49A33 203 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 KLF17Q5JT82 389 aaPredicted RBP9.68□□□□□ -0.86
TMF1-201ENST00000398559 CD177Q8N6Q3 437 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 MCRIP2Q9BUT9 160 aaKnown RBP9.68□□□□□ -0.86
TMF1-201ENST00000398559 TRAV41A0A0B4J266 112 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 WNT2P09544 360 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 UBE2V1Q13404 147 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 GGNQ86UU5 652 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 RCHY1Q96PM5 261 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 GREB1LQ9C091 1923 aaPredicted RBP9.68□□□□□ -0.86
TMF1-201ENST00000398559 ESPL1Q14674 2120 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 LTBP4Q8N2S1 1624 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 SSBP2P81877 361 aaPredicted RBP9.68□□□□□ -0.86
TMF1-201ENST00000398559 ZNF415Q09FC8 603 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 RNF144BQ7Z419 303 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 DLX4Q92988 240 aaPredicted RBP9.68□□□□□ -0.86
TMF1-201ENST00000398559 CST9LQ9H4G1 147 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 TRAV40A0A0B4J280 105 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 TNFRSF6BO95407 300 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 FAM166AQ6J272 317 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 ZNF562Q6V9R5 426 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 PLEKHB2Q96CS7 222 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 METRNQ9UJH8 293 aa9.68□□□□□ -0.86
TMF1-201ENST00000398559 LGALS1P09382 135 aaKnown RBP9.67□□□□□ -0.86
TMF1-201ENST00000398559 PSG3Q16557 428 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 Q8TAT8 98 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 C5orf63A6NC05 138 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 KLRD1Q13241 179 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 VMO1Q7Z5L0 202 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 CASP8AP2Q9UKL3 1982 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 LOC285556D6RIA3 1793 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 IGHV1-3A0A0C4DH29 117 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 SMKR1H3BMG3 65 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 TMEM158Q8WZ71 300 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 ALPK2Q86TB3 2170 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 A0A1B0GWJ7 208 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 LURAP1LQ8IV03 231 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 PNRC2Q9NPJ4 139 aaKnown RBP9.67□□□□□ -0.86
TMF1-201ENST00000398559 SRRM5B3KS81 715 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 IGHV1-8P0DP01 117 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 ADCYAP1P18509 176 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 TMEM249Q2WGJ8 235 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 C11orf44Q8N8P7 122 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 MPDZO75970 2070 aa9.67□□□□□ -0.86
TMF1-201ENST00000398559 PAX4O43316 350 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 TMEM219Q86XT9 240 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 MRPL27Q9P0M9 148 aaKnown RBP9.66□□□□□ -0.86
TMF1-201ENST00000398559 LY96Q9Y6Y9 160 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 NDPQ00604 133 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 WNK3Q9BYP7 1800 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 IGFL4Q6B9Z1 124 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 LINC00473A8K010 186 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 VGLL1Q99990 258 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 DPH3P1Q9H4G8 78 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 JPT2Q9H910 190 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 ZNF581Q9P0T4 197 aa9.66□□□□□ -0.86
TMF1-201ENST00000398559 FREM3P0C091 2139 aa9.65□□□□□ -0.86
TMF1-201ENST00000398559 ZNF329Q86UD4 541 aa9.65□□□□□ -0.86
TMF1-201ENST00000398559 EDA2RQ9HAV5 297 aa9.65□□□□□ -0.86
TMF1-201ENST00000398559 LINC00205P59089 165 aa9.65□□□□□ -0.86
TMF1-201ENST00000398559 NSUN5P1Q3KNT7 163 aa9.65□□□□□ -0.86
TMF1-201ENST00000398559 ZNF48Q96MX3 618 aaPredicted RBP9.65□□□□□ -0.86
TMF1-201ENST00000398559 SRRM4A7MD48 611 aaKnown RBP9.65□□□□□ -0.86
TMF1-201ENST00000398559 H0YJW9 148 aa9.65□□□□□ -0.86
TMF1-201ENST00000398559 PRADC1Q9BSG0 188 aa9.65□□□□□ -0.86
TMF1-201ENST00000398559 LYL1P12980 280 aa9.65□□□□□ -0.87
TMF1-201ENST00000398559 LAMTOR3Q9UHA4 124 aa9.65□□□□□ -0.87
TMF1-201ENST00000398559 GAGE12BA1L429 117 aa9.65□□□□□ -0.87
TMF1-201ENST00000398559 QRFPP83859 136 aa9.65□□□□□ -0.87
TMF1-201ENST00000398559 LILRA1O75019 489 aa9.64□□□□□ -0.87
TMF1-201ENST00000398559 VCYO14598 125 aa9.64□□□□□ -0.87
TMF1-201ENST00000398559 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
TMF1-201ENST00000398559 TMEM190Q8WZ59 177 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms