RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 DNAJC4Q9NNZ3 241 aa12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 MRPL27Q9P0M9 148 aaKnown RBP12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 A0A087WW49 117 aa12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 ELOA3CA0A087WX78 387 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 NDUFA4O00483 81 aa12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 CLLU1Q5K131 121 aa12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 C10orf113Q5VZT2 155 aa12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 KLHL30-AS1Q8NEE0 82 aa12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 SLC25A22Q9H936 323 aa12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 SEPSECSQ9HD40 501 aaKnown RBP12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 TSSC4Q9Y5U2 329 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-205ENST00000397406 CTXND1A0A1B0GTU2 59 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 HSPB1P04792 205 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 CDC34P49427 236 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 RHOBP62745 196 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 BLOC1S1P78537 153 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 FAM78BQ5VT40 261 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 MORN5Q5VZ52 161 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 SPATA31B1PQ5VZV4 182 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 RAB24Q969Q5 203 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 UHRF2Q96PU4 802 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 RNF2Q99496 336 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 PBDC1Q9BVG4 233 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 ACTR3CQ9C0K3 210 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 FUT9Q9Y231 359 aa12.97□□□□□ -0.33
TSPAN4-205ENST00000397406 IGHV3OR16-8A0A075B7F1 116 aa12.96□□□□□ -0.33
TSPAN4-205ENST00000397406 A0A1W2PPV4 95 aa12.96□□□□□ -0.33
TSPAN4-205ENST00000397406 EIF3GO75821 320 aaKnown RBP eCLIP12.96□□□□□ -0.33
TSPAN4-205ENST00000397406 RAB14P61106 215 aa12.96□□□□□ -0.33
TSPAN4-205ENST00000397406 DEFB136Q30KP8 78 aa12.96□□□□□ -0.33
TSPAN4-205ENST00000397406 GPHB5Q86YW7 130 aa12.96□□□□□ -0.33
TSPAN4-205ENST00000397406 MBD3L1Q8WWY6 194 aa12.96□□□□□ -0.33
TSPAN4-205ENST00000397406 MRPL32Q9BYC8 188 aaKnown RBP12.96□□□□□ -0.33
TSPAN4-205ENST00000397406 HIGD1AQ9Y241 93 aa12.96□□□□□ -0.33
TSPAN4-205ENST00000397406 ADARB2-AS1A8MUL3 147 aa12.96□□□□□ -0.34
TSPAN4-205ENST00000397406 UNQ9165/PRO28630Q6UXU0 137 aa12.96□□□□□ -0.34
TSPAN4-205ENST00000397406 C8orf86Q6ZUL3 223 aa12.96□□□□□ -0.34
TSPAN4-205ENST00000397406 MIR17HGQ75NE6 70 aa12.96□□□□□ -0.34
TSPAN4-205ENST00000397406 LINC00305Q7Z4B0 112 aa12.96□□□□□ -0.34
TSPAN4-205ENST00000397406 LYPD6BQ8NI32 183 aa12.96□□□□□ -0.34
TSPAN4-205ENST00000397406 A0A1W2PRX2 142 aa12.95□□□□□ -0.34
TSPAN4-205ENST00000397406 NUDT19A8MXV4 375 aa12.95□□□□□ -0.34
TSPAN4-205ENST00000397406 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
TSPAN4-205ENST00000397406 H2AFB1P0C5Y9 115 aa12.95□□□□□ -0.34
TSPAN4-205ENST00000397406 RPEL1Q2QD12 228 aa12.95□□□□□ -0.34
TSPAN4-205ENST00000397406 TMEM190Q8WZ59 177 aa12.95□□□□□ -0.34
TSPAN4-205ENST00000397406 SLC25A39Q9BZJ4 359 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-205ENST00000397406 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
TSPAN4-205ENST00000397406 MAP1LC3B2A6NCE7 125 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 LINC01619G3V211 115 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 H3BRN7 92 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 STAG3L2P0CL84 134 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 STAG3L3P0CL85 134 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 HOXD3P31249 432 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 LCN15Q6UWW0 184 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 OR11H1Q8NG94 326 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 OR1N2Q8NGR9 330 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 SHANK2-AS3Q9BTD1 123 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 MAP1LC3BQ9GZQ8 125 aa12.94□□□□□ -0.34
TSPAN4-205ENST00000397406 WNK1Q9H4A3 2382 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 TRAV1-1A0A0B4J248 108 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 TRAV5A0A0B4J249 113 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 ZP3P21754 424 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 FAM106AQ4KMX7 169 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 SFT2D1Q8WV19 159 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 RAX2Q96IS3 184 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 FAM167A-AS1Q96KT0 104 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 DUX3Q96PT4 197 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 C20orf24Q9BUV8 137 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 SCRT1Q9BWW7 348 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 SLC25A2Q9BXI2 301 aa12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 TECRQ9NZ01 308 aaKnown RBP12.93□□□□□ -0.34
TSPAN4-205ENST00000397406 ZNF207O43670 478 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 C8orf88P0DMB2 117 aa12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 CRYBB3P26998 211 aa12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 SLURP1P55000 103 aa12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 FGF8P55075 233 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 FHL3Q13643 280 aa12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 KLF5Q13887 457 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 REC114Q7Z4M0 266 aa12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 NDUFA11Q86Y39 141 aa12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 DPF1Q92782 380 aa12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 HRH4Q9H3N8 390 aa12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 U3KQE9 123 aa12.92□□□□□ -0.34
TSPAN4-205ENST00000397406 A0A1B0GV50 99 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 ZNF320A2RRD8 509 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 ZNF98A6NK75 572 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 LGALS9O00182 355 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 HBE1P02100 147 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 TAS2R45P59539 299 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 CCL20P78556 96 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 DEFA6Q01524 100 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 LEMD1Q68G75 181 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 ZNF503Q96F45 646 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 METTL26Q96S19 204 aa12.91□□□□□ -0.34
TSPAN4-205ENST00000397406 A8MWP6 167 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 K7EMT4 169 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 CCL24O00175 119 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 APOHP02749 345 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms