RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 ARL3P36405 182 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 KHDC3LQ587J8 217 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 SPATA31B1PQ5VZV4 182 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 TOMM20LQ6UXN7 152 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 OR5AU1Q8NGC0 362 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 SHANK2-AS3Q9BTD1 123 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 ARL2-SNX15V9GYD0 113 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 NF1P21359 2839 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 C2CD3Q4AC94 2353 aa10.49□□□□□ -0.73
MCF2L-209ENST00000397036 A0A1B0GUS0 222 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 ANKRD34BA5PLL1 514 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 LGALS1P09382 135 aaKnown RBP10.48□□□□□ -0.73
MCF2L-209ENST00000397036 USF2Q15853 346 aaPredicted RBP10.48□□□□□ -0.73
MCF2L-209ENST00000397036 GPHB5Q86YW7 130 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 SLC25A39Q9BZJ4 359 aaPredicted RBP10.48□□□□□ -0.73
MCF2L-209ENST00000397036 TMEM167BQ9NRX6 74 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 DOK5Q9P104 306 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 RBFOX3A6NFN3 312 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 H3BRN7 92 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 IFNA1P01562 189 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 ARL14EPLP0DKL9 152 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 GCHFRP30047 84 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 FGF8P55075 233 aaPredicted RBP10.48□□□□□ -0.73
MCF2L-209ENST00000397036 PEA15Q15121 130 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 GUK1Q16774 197 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 ZNF506Q5JVG8 444 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 LCNL1Q6ZST4 164 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 TXNDC17Q9BRA2 123 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 MANBALQ9NQG1 85 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 TMEM14CQ9P0S9 112 aa10.48□□□□□ -0.73
MCF2L-209ENST00000397036 CLPSL1A2RUU4 121 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 I3L521 148 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 HMGB3O15347 200 aaKnown RBP10.47□□□□□ -0.73
MCF2L-209ENST00000397036 IGHV3-11P01762 117 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 MORN5Q5VZ52 161 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 ZNF503Q96F45 646 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 UHRF2Q96PU4 802 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 SLC25A2Q9BXI2 301 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 RABAC1Q9UI14 185 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 U3KQE9 123 aa10.47□□□□□ -0.73
MCF2L-209ENST00000397036 ZNF98A6NK75 572 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 PPP5D1E7EU14 171 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 K7EMT4 169 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 ATP6V1G1O75348 118 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 TRBV12-3P01733 135 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 HSPB1P04792 205 aaKnown RBP10.46□□□□□ -0.74
MCF2L-209ENST00000397036 BCL2P10415 239 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 CRYBB3P26998 211 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 PROK1P58294 105 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 C1orf194Q5T5A4 169 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 TMEM190Q8WZ59 177 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 OR51M1Q9H341 326 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 GNB4Q9HAV0 340 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 GNG13Q9P2W3 67 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 VAX2Q9UIW0 290 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 MAST4O15021 2626 aa10.46□□□□□ -0.74
MCF2L-209ENST00000397036 SETD2Q9BYW2 2564 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-209ENST00000397036 TRAV5A0A0B4J249 113 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 LOC102723971A0A1B0GUV8 181 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 A0A1B0GV50 99 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 S100A1P23297 94 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 FAM106AQ4KMX7 169 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 C4orf3Q8WVX3 66 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 CITED4Q96RK1 184 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 PAXXQ9BUH6 204 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 EIF5A2Q9GZV4 153 aaKnown RBP10.45□□□□□ -0.74
MCF2L-209ENST00000397036 TMPRSS5Q9H3S3 457 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 RNF114Q9Y508 228 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 JMJD1CQ15652 2540 aa10.45□□□□□ -0.74
MCF2L-209ENST00000397036 OR7C2O60412 319 aa10.44□□□□□ -0.74
MCF2L-209ENST00000397036 EIF3GO75821 320 aaKnown RBP eCLIP10.44□□□□□ -0.74
MCF2L-209ENST00000397036 BPIFA4PQ86YQ2 179 aa10.44□□□□□ -0.74
MCF2L-209ENST00000397036 GPR82Q96P67 336 aa10.44□□□□□ -0.74
MCF2L-209ENST00000397036 METTL26Q96S19 204 aa10.44□□□□□ -0.74
MCF2L-209ENST00000397036 NKX6-2Q9C056 277 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-209ENST00000397036 IGHV3-35A0A0C4DH35 117 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 A0A1W2PRE2 83 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 TMEM218A2RU14 115 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 KRBOX1C9JBD0 128 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 LGALS9O00182 355 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 MRPS12O15235 138 aaKnown RBP10.43□□□□□ -0.74
MCF2L-209ENST00000397036 BUB3O43684 328 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 HIST1H1EP10412 219 aaKnown RBP10.43□□□□□ -0.74
MCF2L-209ENST00000397036 GP9P14770 177 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 ZP3P21754 424 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 NPPCP23582 126 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 SRSF3P84103 164 aaKnown RBP10.43□□□□□ -0.74
MCF2L-209ENST00000397036 ICAM4Q14773 271 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 TOR2AQ5JU69 321 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 FXYD5Q96DB9 178 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 RPL7P18124 248 aaKnown RBP10.43□□□□□ -0.74
MCF2L-209ENST00000397036 HAGHQ16775 308 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 REC114Q7Z4M0 266 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 RARRES2Q99969 163 aa10.43□□□□□ -0.74
MCF2L-209ENST00000397036 TSSC4Q9Y5U2 329 aaPredicted RBP10.43□□□□□ -0.74
MCF2L-209ENST00000397036 TMEM250H0YL14 139 aa10.42□□□□□ -0.74
MCF2L-209ENST00000397036 PAGE4O60829 102 aa10.42□□□□□ -0.74
MCF2L-209ENST00000397036 NBEAP1P0C6P0 100 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms