RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
HOXA3-202ENST00000396352 TRAV9-2A0A087WT02 112 aa12.53□□□□□ -0.4
HOXA3-202ENST00000396352 CD24P25063 80 aa12.53□□□□□ -0.4
HOXA3-202ENST00000396352 PAX2Q02962 417 aa12.53□□□□□ -0.4
HOXA3-202ENST00000396352 C8orf46Q8TAG6 207 aa12.53□□□□□ -0.4
HOXA3-202ENST00000396352 C22orf15Q8WYQ4 148 aa12.52□□□□□ -0.4
HOXA3-202ENST00000396352 A8MWL6 223 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 P01737 135 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 CLEC5AQ9NY25 188 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 JKAMPQ9P055 326 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 SIGLEC9Q9Y336 463 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 SH2D7A6NKC9 451 aaPredicted RBP12.52□□□□□ -0.41
HOXA3-202ENST00000396352 TEX22C9J3V5 150 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 M0QZ24 198 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 PGLYRP4Q96LB8 373 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 MRPS16Q9Y3D3 137 aaKnown RBP12.52□□□□□ -0.41
HOXA3-202ENST00000396352 PKDREJQ9NTG1 2253 aa12.52□□□□□ -0.41
HOXA3-202ENST00000396352 IGLL1P15814 213 aa12.51□□□□□ -0.41
HOXA3-202ENST00000396352 GFRA4Q9GZZ7 299 aa12.51□□□□□ -0.41
HOXA3-202ENST00000396352 SOX21Q9Y651 276 aaPredicted RBP12.51□□□□□ -0.41
HOXA3-202ENST00000396352 IGHV2-26A0A0B4J1V2 119 aa12.51□□□□□ -0.41
HOXA3-202ENST00000396352 NPIPB6E9PJ23 425 aa12.51□□□□□ -0.41
HOXA3-202ENST00000396352 FOXA3P55318 350 aaPredicted RBP12.51□□□□□ -0.41
HOXA3-202ENST00000396352 Q71RC1 249 aaPredicted RBP12.51□□□□□ -0.41
HOXA3-202ENST00000396352 F11RQ9Y624 299 aaKnown RBP12.51□□□□□ -0.41
HOXA3-202ENST00000396352 ZNF292O60281 2723 aa12.51□□□□□ -0.41
HOXA3-202ENST00000396352 ANKRD11Q6UB99 2663 aaPredicted RBP12.51□□□□□ -0.41
HOXA3-202ENST00000396352 C20orf202A1L168 122 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 IGLV1-47P01700 117 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 PRB3Q04118 309 aaPredicted RBP12.5□□□□□ -0.41
HOXA3-202ENST00000396352 Q86TA4 180 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 ZGRF1Q86YA3 2104 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 RBPMS2Q6ZRY4 209 aaKnown RBP12.5□□□□□ -0.41
HOXA3-202ENST00000396352 TRAV8-1A0A0A6YYK1 113 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 IGHV1-24A0A0C4DH33 117 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 OVOL3O00110 214 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 CRXO43186 299 aaPredicted RBP12.5□□□□□ -0.41
HOXA3-202ENST00000396352 IGLV2-11P01706 119 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 OR4F17Q8NGA8 305 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 HIGD1AQ9Y241 93 aa12.5□□□□□ -0.41
HOXA3-202ENST00000396352 SHISA9B4DS77 424 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 PRRG2O14669 202 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 IGLC1P0CG04 106 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 PSG1P11464 419 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 TMEM70Q9BUB7 260 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 ZNF835Q9Y2P0 537 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 TTC28Q96AY4 2481 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 IGHV1-3A0A0C4DH29 117 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 SIAH2O43255 324 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 HOXB4P17483 251 aaPredicted RBP12.49□□□□□ -0.41
HOXA3-202ENST00000396352 TNFRSF14Q92956 283 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 RBM14Q96PK6 669 aaKnown RBP12.49□□□□□ -0.41
HOXA3-202ENST00000396352 E7EQL1 145 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 PPP1R27Q86WC6 154 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 DYNLRB1Q9NP97 96 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 OTORQ9NRC9 128 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 TMEM14CQ9P0S9 112 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 SH3BGRL2Q9UJC5 107 aa12.49□□□□□ -0.41
HOXA3-202ENST00000396352 APOHP02749 345 aaPredicted RBP12.48□□□□□ -0.41
HOXA3-202ENST00000396352 HINT1P49773 126 aaPredicted RBP12.48□□□□□ -0.41
HOXA3-202ENST00000396352 LYZP61626 148 aa12.48□□□□□ -0.41
HOXA3-202ENST00000396352 C16orf54Q6UWD8 224 aa12.48□□□□□ -0.41
HOXA3-202ENST00000396352 LINC00173Q6ZV60 143 aa12.48□□□□□ -0.41
HOXA3-202ENST00000396352 CIARTQ8N365 385 aaPredicted RBP12.48□□□□□ -0.41
HOXA3-202ENST00000396352 CHCHD1Q96BP2 118 aaKnown RBP12.48□□□□□ -0.41
HOXA3-202ENST00000396352 SLC25A39Q9BZJ4 359 aaPredicted RBP12.48□□□□□ -0.41
HOXA3-202ENST00000396352 FAM231BA6NCW3 169 aa12.48□□□□□ -0.41
HOXA3-202ENST00000396352 IGHV1-69-2A0A0G2JMI3 117 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 BUB1B-PAK6H3BSN5 160 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 I3L2K1 104 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 KLK10O43240 276 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 FAM162BQ5T6X4 162 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 EXOC3-AS1Q8N2X6 119 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 DAZAP1Q96EP5 407 aaKnown RBP12.47□□□□□ -0.41
HOXA3-202ENST00000396352 PPP1R14DQ9NXH3 145 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 C1RLQ9NZP8 487 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 TACC2O95359 2948 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 PCNX1Q96RV3 2341 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 LOC102724200A0A096LPH7 203 aaPredicted RBP12.47□□□□□ -0.41
HOXA3-202ENST00000396352 ZNF785A8K8V0 405 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 INSIG2Q9Y5U4 225 aa12.47□□□□□ -0.41
HOXA3-202ENST00000396352 RBPJQ06330 500 aa12.46□□□□□ -0.41
HOXA3-202ENST00000396352 NDFIP1Q9BT67 221 aa12.46□□□□□ -0.41
HOXA3-202ENST00000396352 FBXL15Q9H469 300 aa12.46□□□□□ -0.41
HOXA3-202ENST00000396352 ZNF318Q5VUA4 2279 aa12.46□□□□□ -0.42
HOXA3-202ENST00000396352 OR4C46A6NHA9 309 aa12.46□□□□□ -0.42
HOXA3-202ENST00000396352 SYS1-DBNDD2H3BUS1 97 aa12.46□□□□□ -0.42
HOXA3-202ENST00000396352 COL8A1P27658 744 aa12.46□□□□□ -0.42
HOXA3-202ENST00000396352 GOLT1AQ6ZVE7 132 aa12.46□□□□□ -0.42
HOXA3-202ENST00000396352 MUC15Q8N387 334 aa12.46□□□□□ -0.42
HOXA3-202ENST00000396352 ORAOV1Q8WV07 137 aa12.46□□□□□ -0.42
HOXA3-202ENST00000396352 SRSF12Q8WXF0 261 aaKnown RBP12.46□□□□□ -0.42
HOXA3-202ENST00000396352 TP73-AS1Q9UF72 201 aa12.46□□□□□ -0.42
HOXA3-202ENST00000396352 HAX1O00165 279 aa12.45□□□□□ -0.42
HOXA3-202ENST00000396352 PRNTQ86SH4 94 aa12.45□□□□□ -0.42
HOXA3-202ENST00000396352 RALYQ9UKM9 306 aaKnown RBP12.45□□□□□ -0.42
HOXA3-202ENST00000396352 VSTM5A8MXK1 200 aa12.45□□□□□ -0.42
HOXA3-202ENST00000396352 TOX4O94842 621 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms