RNA–Protein interactions for RNA: ENST00000395682.3

SHMT1-204, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2

Gene SHMT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-204ENST00000395682 ZFAND6Q6FIF0 208 aa17.41■□□□□ 0.38
SHMT1-204ENST00000395682 STHQ8IWL8 128 aa17.41■□□□□ 0.38
SHMT1-204ENST00000395682 ORM2P19652 201 aa17.4■□□□□ 0.38
SHMT1-204ENST00000395682 NPVFQ9HCQ7 196 aa17.4■□□□□ 0.38
SHMT1-204ENST00000395682 MGAT4CQ9UBM8 478 aa17.4■□□□□ 0.38
SHMT1-204ENST00000395682 FBXL17Q9UF56 701 aa17.4■□□□□ 0.38
SHMT1-204ENST00000395682 KNCNA6PVL3 124 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 FNDC10F2Z333 226 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 INMT-MINDY4F8WBC2 141 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 BCAP31P51572 246 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 DEFA1P59665 94 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 DEFA3P59666 94 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 SNRPD3P62318 126 aaKnown RBP17.39■□□□□ 0.37
SHMT1-204ENST00000395682 ARL16Q0P5N6 197 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 PSMG4Q5JS54 123 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 CYP2G1PQ6ZSU1 146 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 OR8I2Q8N0Y5 310 aa17.39■□□□□ 0.37
SHMT1-204ENST00000395682 IL15RAQ13261 267 aa17.38■□□□□ 0.37
SHMT1-204ENST00000395682 OR1B1Q8NGR6 318 aa17.38■□□□□ 0.37
SHMT1-204ENST00000395682 SEPSECSQ9HD40 501 aaKnown RBP17.38■□□□□ 0.37
SHMT1-204ENST00000395682 SLC45A2Q9UMX9 530 aa17.38■□□□□ 0.37
SHMT1-204ENST00000395682 DEDDO75618 318 aa17.37■□□□□ 0.37
SHMT1-204ENST00000395682 PVALBP20472 110 aaPredicted RBP17.37■□□□□ 0.37
SHMT1-204ENST00000395682 S100A10P60903 97 aa17.37■□□□□ 0.37
SHMT1-204ENST00000395682 ACTL10Q5JWF8 245 aa17.37■□□□□ 0.37
SHMT1-204ENST00000395682 IL17DQ8TAD2 202 aa17.37■□□□□ 0.37
SHMT1-204ENST00000395682 TMEM147Q9BVK8 224 aa17.37■□□□□ 0.37
SHMT1-204ENST00000395682 GGACTQ9BVM4 153 aa17.37■□□□□ 0.37
SHMT1-204ENST00000395682 C11orf1Q9H5F2 150 aa17.37■□□□□ 0.37
SHMT1-204ENST00000395682 PRAF2O60831 178 aa17.36■□□□□ 0.37
SHMT1-204ENST00000395682 CA1P00915 261 aaPredicted RBP17.36■□□□□ 0.37
SHMT1-204ENST00000395682 CAV2P51636 162 aa17.36■□□□□ 0.37
SHMT1-204ENST00000395682 SELENOTP62341 195 aa17.36■□□□□ 0.37
SHMT1-204ENST00000395682 TEPPQ6URK8 271 aa17.36■□□□□ 0.37
SHMT1-204ENST00000395682 TRPT1Q86TN4 253 aaKnown RBP17.36■□□□□ 0.37
SHMT1-204ENST00000395682 AGRNO00468 2067 aa17.35■□□□□ 0.37
SHMT1-204ENST00000395682 FAM24AA6NFZ4 105 aa17.35■□□□□ 0.37
SHMT1-204ENST00000395682 ZNF98A6NK75 572 aa17.35■□□□□ 0.37
SHMT1-204ENST00000395682 S100A7P31151 101 aa17.35■□□□□ 0.37
SHMT1-204ENST00000395682 RAB32Q13637 225 aa17.35■□□□□ 0.37
SHMT1-204ENST00000395682 MARVELD1Q9BSK0 173 aa17.35■□□□□ 0.37
SHMT1-204ENST00000395682 SLC25A22Q9H936 323 aa17.35■□□□□ 0.37
SHMT1-204ENST00000395682 DOK5Q9P104 306 aa17.35■□□□□ 0.37
SHMT1-204ENST00000395682 KMT2CQ8NEZ4 4911 aaKnown RBP17.35■□□□□ 0.37
SHMT1-204ENST00000395682 A0A0J9YWU9 116 aa17.34■□□□□ 0.37
SHMT1-204ENST00000395682 HYPMO75409 117 aa17.34■□□□□ 0.37
SHMT1-204ENST00000395682 CST7O76096 145 aa17.34■□□□□ 0.37
SHMT1-204ENST00000395682 SIX6O95475 246 aa17.34■□□□□ 0.37
SHMT1-204ENST00000395682 GATAD1Q8WUU5 269 aa17.34■□□□□ 0.37
SHMT1-204ENST00000395682 SLC25A32Q9H2D1 315 aa17.34■□□□□ 0.37
SHMT1-204ENST00000395682 LINC00869P0C866 280 aa17.33■□□□□ 0.36
SHMT1-204ENST00000395682 ID1P41134 155 aa17.33■□□□□ 0.36
SHMT1-204ENST00000395682 GALR1P47211 349 aa17.33■□□□□ 0.36
SHMT1-204ENST00000395682 SLC38A11Q08AI6 406 aa17.33■□□□□ 0.36
SHMT1-204ENST00000395682 HIGD1AQ9Y241 93 aa17.33■□□□□ 0.36
SHMT1-204ENST00000395682 GOSR2O14653 212 aa17.32■□□□□ 0.36
SHMT1-204ENST00000395682 OR5G3P0C626 314 aa17.32■□□□□ 0.36
SHMT1-204ENST00000395682 PLP1P60201 277 aa17.32■□□□□ 0.36
SHMT1-204ENST00000395682 RAP2BP61225 183 aa17.32■□□□□ 0.36
SHMT1-204ENST00000395682 MORN3Q6PF18 240 aaPredicted RBP17.32■□□□□ 0.36
SHMT1-204ENST00000395682 TMEM217Q8N7C4 229 aa17.32■□□□□ 0.36
SHMT1-204ENST00000395682 LINC00052Q96N35 136 aa17.32■□□□□ 0.36
SHMT1-204ENST00000395682 RARRES2Q99969 163 aa17.32■□□□□ 0.36
SHMT1-204ENST00000395682 RSG1Q9BU20 258 aa17.32■□□□□ 0.36
SHMT1-204ENST00000395682 SLC25A39Q9BZJ4 359 aaPredicted RBP17.32■□□□□ 0.36
SHMT1-204ENST00000395682 LYRM2Q9NU23 88 aaPredicted RBP17.32■□□□□ 0.36
SHMT1-204ENST00000395682 GIG44P09565 113 aaPredicted RBP17.31■□□□□ 0.36
SHMT1-204ENST00000395682 SPP1P10451 314 aa17.31■□□□□ 0.36
SHMT1-204ENST00000395682 OR11H2Q8NH07 326 aa17.31■□□□□ 0.36
SHMT1-204ENST00000395682 SCRT1Q9BWW7 348 aa17.31■□□□□ 0.36
SHMT1-204ENST00000395682 ARL6Q9H0F7 186 aa17.31■□□□□ 0.36
SHMT1-204ENST00000395682 SOCS3O14543 225 aa17.3■□□□□ 0.36
SHMT1-204ENST00000395682 AGPAT2O15120 278 aa17.3■□□□□ 0.36
SHMT1-204ENST00000395682 PSMB3P49720 205 aa17.3■□□□□ 0.36
SHMT1-204ENST00000395682 TMEM252Q8N6L7 170 aa17.3■□□□□ 0.36
SHMT1-204ENST00000395682 GPR82Q96P67 336 aa17.3■□□□□ 0.36
SHMT1-204ENST00000395682 SHANK2-AS3Q9BTD1 123 aa17.3■□□□□ 0.36
SHMT1-204ENST00000395682 CSMD3Q7Z407 3707 aa17.29■□□□□ 0.36
SHMT1-204ENST00000395682 IGSF23A1L1A6 192 aa17.29■□□□□ 0.36
SHMT1-204ENST00000395682 H3BRN7 92 aa17.29■□□□□ 0.36
SHMT1-204ENST00000395682 SULT1A1P50225 295 aa17.29■□□□□ 0.36
SHMT1-204ENST00000395682 TMEM41BQ5BJD5 291 aa17.29■□□□□ 0.36
SHMT1-204ENST00000395682 ZNF546Q86UE3 836 aa17.29■□□□□ 0.36
SHMT1-204ENST00000395682 NMES1Q9C002 83 aa17.29■□□□□ 0.36
SHMT1-204ENST00000395682 TENM2Q9NT68 2774 aa17.29■□□□□ 0.36
SHMT1-204ENST00000395682 H3BMM0 161 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 ISLRO14498 428 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 S100A11P31949 105 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 MEOX2P50222 304 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 EWSR1Q01844 656 aaKnown RBP eCLIP17.28■□□□□ 0.36
SHMT1-204ENST00000395682 SAMD13Q5VXD3 122 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 PATE2Q6UY27 113 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 STX12Q86Y82 276 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 C16orf92Q96LL3 132 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 C17orf77Q96MU5 243 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 UHRF2Q96PU4 802 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 MGST2Q99735 147 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 UQCC1Q9NVA1 299 aa17.28■□□□□ 0.36
SHMT1-204ENST00000395682 SSNA1O43805 119 aa17.27■□□□□ 0.36
SHMT1-204ENST00000395682 RLN2P04090 185 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms