RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 NDUFB8O95169 186 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 RBPJQ06330 500 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 WFDC8Q8IUA0 241 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 STXBP6Q8NFX7 210 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 URB1-AS1Q96HZ7 61 aa14.69□□□□□ -0.06
PCDHA1-202ENST00000394633 NDUFB3O43676 98 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 ZNF137PP52743 207 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 DLX6P56179 175 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 C11orf42Q8N5U0 333 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 GPR82Q96P67 336 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 CTSZQ9UBR2 303 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 TMEM8BA6NDV4 472 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 C2orf70A6NJV1 201 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 NBEAP1P0C6P0 100 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 KIR3DL3Q8N743 410 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 SMIM12Q96EX1 92 aa14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 RPP21Q9H633 154 aaKnown RBP14.68□□□□□ -0.06
PCDHA1-202ENST00000394633 IGHV3-72A0A0B4J1Y9 119 aa14.67□□□□□ -0.06
PCDHA1-202ENST00000394633 LOXP28300 417 aaPredicted RBP14.67□□□□□ -0.06
PCDHA1-202ENST00000394633 CA7P43166 264 aa14.67□□□□□ -0.06
PCDHA1-202ENST00000394633 Q56UQ5 140 aa14.67□□□□□ -0.06
PCDHA1-202ENST00000394633 PVRIGQ6DKI7 326 aa14.67□□□□□ -0.06
PCDHA1-202ENST00000394633 OR2D3Q8NGH3 330 aa14.67□□□□□ -0.06
PCDHA1-202ENST00000394633 CCL17Q92583 94 aa14.67□□□□□ -0.06
PCDHA1-202ENST00000394633 TRGV9Q99603 122 aa14.67□□□□□ -0.06
PCDHA1-202ENST00000394633 LRRC10Q5BKY1 277 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 ETFRF1Q6IPR1 90 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 SPATA12Q7Z6I5 190 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 PRSS22Q9GZN4 317 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 TRAV9-2A0A087WT02 112 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 ENSAO43768 121 aaKnown RBP14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 GP9P14770 177 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 TSPOP30536 169 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 HBBP68871 147 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 BSPH1Q075Z2 132 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 GTSF1Q8WW33 167 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 VKORC1Q9BQB6 163 aa14.66□□□□□ -0.06
PCDHA1-202ENST00000394633 IGHV3-21A0A0B4J1V1 117 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 H3BTX0 84 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 TOMM40O96008 361 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 APELAP0DMC3 54 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 MC5RP33032 325 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 SSX8Q7RTT4 187 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 CLEC5AQ9NY25 188 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 SPTBN1Q01082 2364 aaKnown RBP14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 C19orf71A6NCJ1 209 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 LTAP01374 205 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 DMRTA1Q5VZB9 504 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 LEMD1Q68G75 181 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 C5orf17Q8NAS9 161 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 JKAMPQ9P055 326 aa14.65□□□□□ -0.06
PCDHA1-202ENST00000394633 SH2D7A6NKC9 451 aaPredicted RBP14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 C16orf97H3BN30 126 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 SIAH2O43255 324 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 THBDP07204 575 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 CD24P25063 80 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 LGALS7P47929 136 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 TMEM155Q4W5P6 130 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 FAM120AOSQ5T036 256 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 FMC1Q96HJ9 113 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 ZNF492Q9P255 531 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 MRPS16Q9Y3D3 137 aaKnown RBP14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 A8MWL6 223 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 IGLL1P15814 213 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 CNTFRP26992 372 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 RPL27AP46776 148 aaKnown RBP14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 TMEM116Q8NCL8 245 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 Q9H3A6 140 aa14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 GSX1Q9H4S2 264 aaPredicted RBP14.64□□□□□ -0.07
PCDHA1-202ENST00000394633 IGHV2-26A0A0B4J1V2 119 aa14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 M0QZ24 198 aa14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 P01737 135 aa14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 TCRAP04437 139 aa14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 IGHV1-8P0DP01 117 aa14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 CT83Q5H943 113 aa14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 TEX45Q8NA69 505 aa14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 C22orf15Q8WYQ4 148 aa14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 PGLYRP4Q96LB8 373 aa14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 ANKHD1Q8IWZ3 2542 aaKnown RBP14.63□□□□□ -0.07
PCDHA1-202ENST00000394633 HINT1P49773 126 aaPredicted RBP14.62□□□□□ -0.07
PCDHA1-202ENST00000394633 FOXA3P55318 350 aaPredicted RBP14.62□□□□□ -0.07
PCDHA1-202ENST00000394633 PPP1R14DQ9NXH3 145 aa14.62□□□□□ -0.07
PCDHA1-202ENST00000394633 C20orf202A1L168 122 aa14.62□□□□□ -0.07
PCDHA1-202ENST00000394633 CRYGBP07316 175 aa14.62□□□□□ -0.07
PCDHA1-202ENST00000394633 PLP1P60201 277 aa14.62□□□□□ -0.07
PCDHA1-202ENST00000394633 CCL21O00585 134 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 LRBAP50851 2863 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 CDSNQ15517 529 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 C8orf46Q8TAG6 207 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 TMEM70Q9BUB7 260 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 SOX21Q9Y651 276 aaPredicted RBP14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 MALRD1Q5VYJ5 2156 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 TCF21O43680 179 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 SFTPCP11686 197 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 DLX1P56177 255 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 TMEM133Q9H2Q1 129 aa14.61□□□□□ -0.07
PCDHA1-202ENST00000394633 OR4F17Q8NGA8 305 aa14.6□□□□□ -0.07
PCDHA1-202ENST00000394633 KAAG1Q9UBP8 84 aa14.6□□□□□ -0.07
PCDHA1-202ENST00000394633 PKDREJQ9NTG1 2253 aa14.6□□□□□ -0.07
PCDHA1-202ENST00000394633 IGHV1-24A0A0C4DH33 117 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms