RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 LINC01559Q495D7 138 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 SPSB3Q6PJ21 355 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 COLCA1Q6ZS62 124 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 TMEM105Q8N8V8 129 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 TRGV9Q99603 122 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 SLC25A2Q9BXI2 301 aa10.78□□□□□ -0.68
LCA5-202ENST00000392959 PRB4P10163 310 aaPredicted RBP10.77□□□□□ -0.68
LCA5-202ENST00000392959 BMPERQ8N8U9 685 aa10.77□□□□□ -0.68
LCA5-202ENST00000392959 MBNL3Q9NUK0 354 aaKnown RBP10.77□□□□□ -0.68
LCA5-202ENST00000392959 ANK1P16157 1881 aa10.77□□□□□ -0.68
LCA5-202ENST00000392959 TRGV2A0A075B6R0 118 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 IGHV2-26A0A0B4J1V2 119 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 D6R8Y8 96 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 PLNP26678 52 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 CFPP27918 469 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 ASCL4Q6XD76 172 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 DUSP14O95147 198 aaKnown RBP10.77□□□□□ -0.69
LCA5-202ENST00000392959 NCR2O95944 276 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 RNF182Q8N6D2 247 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 IGHV1-8P0DP01 117 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 TMEM200BQ69YZ2 307 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 ZNF664Q8N3J9 261 aa10.77□□□□□ -0.69
LCA5-202ENST00000392959 IGKV2-40A0A087WW87 121 aaPredicted RBP10.76□□□□□ -0.69
LCA5-202ENST00000392959 IGKV2D-40P01614 121 aaPredicted RBP10.76□□□□□ -0.69
LCA5-202ENST00000392959 PAX8Q06710 450 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 TMEM95Q3KNT9 176 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 CD300EQ496F6 205 aaPredicted RBP10.76□□□□□ -0.69
LCA5-202ENST00000392959 TRAV2A0A0B4J234 112 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 LINC01549A6NIU2 74 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 OVOL1O14753 267 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 THBDP07204 575 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 PRR31Q5SQ13 230 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 IGKV3D-20A0A0C4DH25 116 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 FOXL2NBQ6ZUU3 175 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 DMRTC2Q8IXT2 367 aaPredicted RBP10.76□□□□□ -0.69
LCA5-202ENST00000392959 MRPL27Q9P0M9 148 aaKnown RBP10.76□□□□□ -0.69
LCA5-202ENST00000392959 LINC00205P59089 165 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 LYZL1Q6UWQ5 148 aa10.76□□□□□ -0.69
LCA5-202ENST00000392959 SIGMAR1Q99720 223 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 NPFFR1Q9GZQ6 430 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 SLC25A15Q9Y619 301 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 DOCK9Q9BZ29 2069 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 E9PLN8 166 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 PAX2Q02962 417 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 ZNF672Q499Z4 452 aaPredicted RBP10.75□□□□□ -0.69
LCA5-202ENST00000392959 C20orf204Q6ZNR8 217 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 hDV102S1A0JD36 115 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 RPL15P61313 204 aaKnown RBP10.75□□□□□ -0.69
LCA5-202ENST00000392959 Q0VFX4 171 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 GUSBP1Q15486 140 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 C15orf32Q32M92 178 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 MPV17L2Q567V2 206 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 NAA38Q9BRA0 125 aaKnown RBP10.75□□□□□ -0.69
LCA5-202ENST00000392959 PEMTQ9UBM1 199 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 IGHV1-3A0A0C4DH29 117 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 A8MWV9 139 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 RIPPLY3P57055 190 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 LAGE3Q14657 143 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 BCL6BQ8N143 479 aaPredicted RBP10.75□□□□□ -0.69
LCA5-202ENST00000392959 RPRMLQ8N4K4 120 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 RNF5Q99942 180 aa10.75□□□□□ -0.69
LCA5-202ENST00000392959 IGHV4-39P01824 125 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 SPOCK3Q9BQ16 436 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 TRAV8-1A0A0A6YYK1 113 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 RBMY1BA6NDE4 496 aaKnown RBP10.74□□□□□ -0.69
LCA5-202ENST00000392959 RBMY1EA6NEQ0 496 aaKnown RBP10.74□□□□□ -0.69
LCA5-202ENST00000392959 TMEM178BH3BS89 294 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 NDUFS6O75380 124 aaKnown RBP10.74□□□□□ -0.69
LCA5-202ENST00000392959 RBMY1DP0C7P1 496 aaKnown RBP10.74□□□□□ -0.69
LCA5-202ENST00000392959 RBMY1A1P0DJD3 496 aaKnown RBP10.74□□□□□ -0.69
LCA5-202ENST00000392959 RBMY1CP0DJD4 496 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 CD59P13987 128 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 CSRP1P21291 193 aaKnown RBP10.74□□□□□ -0.69
LCA5-202ENST00000392959 B3GALT5-AS1P59052 145 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 LINC00527Q9UJ94 153 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 H0YJW9 148 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 CD28P10747 220 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 SIGLEC15Q6ZMC9 328 aa10.74□□□□□ -0.69
LCA5-202ENST00000392959 TRAV12-3A0A0B4J271 114 aa10.73□□□□□ -0.69
LCA5-202ENST00000392959 SYS1-DBNDD2H3BUS1 97 aa10.73□□□□□ -0.69
LCA5-202ENST00000392959 TDGF1P13385 188 aa10.73□□□□□ -0.69
LCA5-202ENST00000392959 KLF17Q5JT82 389 aaPredicted RBP10.73□□□□□ -0.69
LCA5-202ENST00000392959 NUP37Q8NFH4 326 aa10.73□□□□□ -0.69
LCA5-202ENST00000392959 WNK3Q9BYP7 1800 aa10.73□□□□□ -0.69
LCA5-202ENST00000392959 YAE1D1Q9NRH1 226 aa10.73□□□□□ -0.69
LCA5-202ENST00000392959 THADAQ6YHU6 1953 aa10.73□□□□□ -0.69
LCA5-202ENST00000392959 IGKV1D-17A0A075B6S4 117 aa10.73□□□□□ -0.69
LCA5-202ENST00000392959 PRSS22Q9GZN4 317 aa10.73□□□□□ -0.69
LCA5-202ENST00000392959 A0A087X0K7 114 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 RNASE2P10153 161 aaKnown RBP10.72□□□□□ -0.69
LCA5-202ENST00000392959 HEATR5AQ86XA9 2040 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 IGKV1-6A0A0C4DH72 117 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 CFAP161Q6P656 301 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 SCN5AQ14524 2016 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 TRGV11A0A075B6L2 103 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 TRAV41A0A0B4J266 112 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms