RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 ORM2P19652 201 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 GATA2P23769 480 aaPredicted RBP11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 EWSR1Q01844 656 aaKnown RBP eCLIP11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 VWC2Q2TAL6 325 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 ODF3L2Q3SX64 289 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 C1orf194Q5T5A4 169 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 SIGLEC15Q6ZMC9 328 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 TMEM182Q6ZP80 229 aaPredicted RBP11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 S100A7AQ86SG5 101 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 WFDC3Q8IUB2 231 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 STXBP6Q8NFX7 210 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 OR11H7Q8NGC8 314 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 OR1B1Q8NGR6 318 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 ASB13Q8WXK3 278 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 DNAH9Q9NYC9 4486 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 FBXL17Q9UF56 701 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 UBQLN2Q9UHD9 624 aa11.22□□□□□ -0.61
IGHV3-53-201ENST00000390627 UBE2L5PA0A1B0GUS4 154 aa11.21□□□□□ -0.61
IGHV3-53-201ENST00000390627 AGPAT2O15120 278 aa11.21□□□□□ -0.61
IGHV3-53-201ENST00000390627 PLP1P60201 277 aa11.21□□□□□ -0.61
IGHV3-53-201ENST00000390627 RAP2BP61225 183 aa11.21□□□□□ -0.61
IGHV3-53-201ENST00000390627 ASCL2Q99929 193 aa11.21□□□□□ -0.61
IGHV3-53-201ENST00000390627 RNF126Q9BV68 326 aa11.21□□□□□ -0.61
IGHV3-53-201ENST00000390627 MBD2Q9UBB5 411 aa11.21□□□□□ -0.61
IGHV3-53-201ENST00000390627 WDR83OSQ9Y284 106 aa11.21□□□□□ -0.61
IGHV3-53-201ENST00000390627 HYPMO75409 117 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 CAMLGP49069 296 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 NHLH2Q02577 135 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 PXDC1Q5TGL8 231 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 SBSPONQ8IVN8 264 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 OR5C1Q8NGR4 320 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 THAP6Q8TBB0 222 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 MGST2Q99735 147 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 DOK5Q9P104 306 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 HIGD1AQ9Y241 93 aa11.2□□□□□ -0.62
IGHV3-53-201ENST00000390627 K7EQG2 157 aa11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 MPDU1O75352 247 aa11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 GIPP09681 153 aaPredicted RBP11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 OR5G3P0C626 314 aa11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 FGL1Q08830 312 aa11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 STPG3Q8N7X2 389 aa11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 MAP6D1Q9H9H5 199 aa11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 NRN1Q9NPD7 142 aa11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
IGHV3-53-201ENST00000390627 LOC102724200A0A096LPH7 203 aaPredicted RBP11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 RBMY1BA6NDE4 496 aaKnown RBP11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 RBMY1EA6NEQ0 496 aaKnown RBP11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 ZNF98A6NK75 572 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 RBMY1DP0C7P1 496 aaKnown RBP11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 LYL1P12980 280 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 FGF7P21781 194 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 RPL12P30050 165 aaKnown RBP11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 CLINT1Q14677 625 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 LINC00322Q6ZN03 302 aaPredicted RBP11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 DCANP1Q8TF63 244 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 GPR82Q96P67 336 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 GGTLC1Q9BX51 225 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 SLC25A39Q9BZJ4 359 aaPredicted RBP11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 ARL6Q9H0F7 186 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 SLC25A22Q9H936 323 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 HSPB11Q9Y547 144 aa11.18□□□□□ -0.62
IGHV3-53-201ENST00000390627 H3BRN7 92 aa11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 GALR1P47211 349 aa11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 SAMD13Q5VXD3 122 aa11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 Q6ZRG5 221 aa11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 CHAC2Q8WUX2 184 aa11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 SHANK2-AS3Q9BTD1 123 aa11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 ARV1Q9H2C2 271 aa11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 ZMAT4Q9H898 229 aa11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
IGHV3-53-201ENST00000390627 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 COX7A2P2O60397 106 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 ZNF688P0C7X2 276 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 RPL29P47914 159 aaKnown RBP11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 DEFB131AP59861 70 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 SNRPD3P62318 126 aaKnown RBP11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 OPCMLQ14982 345 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 HAGHQ16775 308 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 APRG1Q8IVJ8 170 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 FAM24BQ8N5W8 94 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 ATP5SQ99766 215 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 TM2D3Q9BRN9 247 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 SCRT1Q9BWW7 348 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 SLC25A32Q9H2D1 315 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 KCNIP2Q9NS61 270 aa11.16□□□□□ -0.62
IGHV3-53-201ENST00000390627 RPL7P18124 248 aaKnown RBP11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 MEOX2P50222 304 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 APOC4P55056 127 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 B2MP61769 119 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 PRR20EP86478 221 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 PRR20CP86479 221 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 PRR20DP86480 221 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 PRR20BP86481 221 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 PRR20AP86496 221 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 MIC13Q5XKP0 118 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 OR1L4Q8NGR5 311 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 UHRF2Q96PU4 802 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 SPATA25Q9BR10 227 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms