RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 RPEL1Q2QD12 228 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 FXYD5Q96DB9 178 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 OSTCQ9NRP0 149 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 PAM16Q9Y3D7 125 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 ATRXP46100 2492 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 I3L2K1 104 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 RASL11BQ9BPW5 248 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 COL6A6A6NMZ7 2263 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 UBE2V1Q13404 147 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 TMEM183BQ1AE95 376 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 C5orf64Q2M2E5 130 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 C19orf35Q6ZS72 473 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 NUDT11Q96G61 164 aa10.03□□□□□ -0.8
VPS16-202ENST00000380445 USP24Q9UPU5 2620 aa10.02□□□□□ -0.8
VPS16-202ENST00000380445 NBASA2RRP1 2371 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 IGHV3-21A0A0B4J1V1 117 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 ISLRO14498 428 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 NDUFB8O95169 186 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 IGLC1P0CG04 106 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 UQCRFS1P47985 274 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 ZNF329Q86UD4 541 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 HIGD1AQ9Y241 93 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 YPEL3P61236 119 aaPredicted RBP10.02□□□□□ -0.81
VPS16-202ENST00000380445 RUSC1-AS1Q66K80 236 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 IGF2BP2-AS1Q96M15 143 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 CSTL1Q9H114 145 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 TBL2Q9Y4P3 447 aaKnown RBP10.02□□□□□ -0.81
VPS16-202ENST00000380445 V9GYV3 84 aa10.02□□□□□ -0.81
VPS16-202ENST00000380445 M0QZ24 198 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 SLC17A3O00476 420 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 PEX7O00628 323 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 NDUFS7O75251 213 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 NBEAP1P0C6P0 100 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 PSG1P11464 419 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 HOXB4P17483 251 aaPredicted RBP10.01□□□□□ -0.81
VPS16-202ENST00000380445 CD33P20138 364 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 ZFP36P26651 326 aaKnown RBP10.01□□□□□ -0.81
VPS16-202ENST00000380445 ZNF562Q6V9R5 426 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 TEX43Q6ZNM6 134 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 STPG4Q8N801 248 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 VAMP8Q9BV40 100 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 ITPR1Q14643 2758 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 IGHV2-70DA0A0C4DH43 119 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 A0A1W2PRD5 423 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 A0A1W2PRF3 423 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 A0A1W2PRM7 423 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 EBI3Q14213 229 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 TMEM256Q8N2U0 113 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 SIRPDQ9H106 197 aa10.01□□□□□ -0.81
VPS16-202ENST00000380445 TOX4O94842 621 aa10□□□□□ -0.81
VPS16-202ENST00000380445 MGST1P10620 155 aaKnown RBP10□□□□□ -0.81
VPS16-202ENST00000380445 BMI1P35226 326 aa10□□□□□ -0.81
VPS16-202ENST00000380445 IBA57Q5T440 356 aaKnown RBP10□□□□□ -0.81
VPS16-202ENST00000380445 CLUHP3Q96NS8 147 aa10□□□□□ -0.81
VPS16-202ENST00000380445 EPG5Q9HCE0 2579 aa10□□□□□ -0.81
VPS16-202ENST00000380445 NCBP2LA6PVI3 153 aaKnown RBP10□□□□□ -0.81
VPS16-202ENST00000380445 NPIPB5A8MRT5 1133 aa10□□□□□ -0.81
VPS16-202ENST00000380445 IGLV2-8P01709 118 aa10□□□□□ -0.81
VPS16-202ENST00000380445 MYCNOSP40205 109 aa10□□□□□ -0.81
VPS16-202ENST00000380445 LYZP61626 148 aa10□□□□□ -0.81
VPS16-202ENST00000380445 COX19Q49B96 90 aa10□□□□□ -0.81
VPS16-202ENST00000380445 S100A7AQ86SG5 101 aa10□□□□□ -0.81
VPS16-202ENST00000380445 TMEM190Q8WZ59 177 aa10□□□□□ -0.81
VPS16-202ENST00000380445 TRAV30A0A087WSZ9 112 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 K7EIM0 57 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 CD24P25063 80 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 UBE2E1P51965 193 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 BLNKQ8WV28 456 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 ARPC1AQ92747 370 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 SMIM12Q96EX1 92 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 C1RLQ9NZP8 487 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 RNF24Q9Y225 148 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 TRBV9A0A0B4J1U6 114 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 PGPA6NDG6 321 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 NUPR1O60356 82 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 GOSR1O95249 250 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 SLC25A5P05141 298 aaKnown RBP9.99□□□□□ -0.81
VPS16-202ENST00000380445 GP9P14770 177 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 UBE2G1P62253 170 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 BAGE2Q86Y30 109 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 Q8N6K4 173 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 CHRDL1Q9BU40 450 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 THYN1Q9P016 225 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 TMEM14CQ9P0S9 112 aa9.99□□□□□ -0.81
VPS16-202ENST00000380445 LRBAP50851 2863 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 C19orf84I3L1E1 186 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 FAM106CPP0CH98 169 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 C5orf17Q8NAS9 161 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 OR4C5Q8NGB2 326 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 SLC25A39Q9BZJ4 359 aaPredicted RBP9.98□□□□□ -0.81
VPS16-202ENST00000380445 RNASE7Q9H1E1 156 aaKnown RBP9.98□□□□□ -0.81
VPS16-202ENST00000380445 ARHGAP32A7KAX9 2087 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 HIVEP3Q5T1R4 2406 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 RELNP78509 3460 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 OVOL3O00110 214 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 CX3CL1P78423 397 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 FAM231DQ6ZW35 169 aa9.98□□□□□ -0.81
VPS16-202ENST00000380445 FAM103A1Q9BTL3 118 aaKnown RBP9.98□□□□□ -0.81
VPS16-202ENST00000380445 MRPL27Q9P0M9 148 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms