RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ZNF79Q15937 498 aa12.53□□□□□ -0.4
PDLIM4-202ENST00000379018 RBPMSQ93062 196 aaKnown RBP12.53□□□□□ -0.4
PDLIM4-202ENST00000379018 TMEM222Q9H0R3 208 aa12.53□□□□□ -0.4
PDLIM4-202ENST00000379018 SCRT2Q9NQ03 307 aa12.53□□□□□ -0.4
PDLIM4-202ENST00000379018 PFDN2Q9UHV9 154 aa12.53□□□□□ -0.4
PDLIM4-202ENST00000379018 ZNF705GA8MUZ8 300 aaPredicted RBP12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 F5H768 121 aa12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 FAM3BP58499 235 aaPredicted RBP12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 ZNF90Q03938 601 aa12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 OR2F1Q13607 317 aa12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 TMEM268Q5VZI3 342 aa12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 FAAP20Q6NZ36 180 aa12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 TERB2Q8NHR7 220 aa12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 C14orf166Q9Y224 244 aaKnown RBP12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 V9GYH0 126 aa12.52□□□□□ -0.41
PDLIM4-202ENST00000379018 SOCS3O14543 225 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 CDS2O95674 445 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 KLF9Q13886 244 aaPredicted RBP12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 AARDQ4LEZ3 155 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 OR8G2PQ6IF36 304 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 SPATA12Q7Z6I5 190 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 Q8N1X5 172 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 GLYATL2Q8WU03 294 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 CHAC2Q8WUX2 184 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 C20orf173Q96LM9 149 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 SOSTQ9BQB4 213 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 NAA60Q9H7X0 242 aa12.51□□□□□ -0.41
PDLIM4-202ENST00000379018 A0A0J9YX75 114 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 RAB3DO95716 219 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 TNFSF8P32971 234 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 DEFA1P59665 94 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 DEFA3P59666 94 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 SUPT4H1P63272 117 aaKnown RBP12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 NMSQ5H8A3 153 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 NOXA1Q86UR1 476 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 ZNRF2Q8NHG8 242 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 C16orf92Q96LL3 132 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 RPRMQ9NS64 109 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 PRR13Q9NZ81 148 aa12.5□□□□□ -0.41
PDLIM4-202ENST00000379018 ISLRO14498 428 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 B3GALNT1O75752 331 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 TBPP20226 339 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 BCAP31P51572 246 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 PAX9P55771 341 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 FCN2Q15485 313 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 SPINK13Q1W4C9 94 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 SPATA31B1PQ5VZV4 182 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 MZT2AQ6P582 158 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 SLC35E1Q96K37 410 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 CLUHP3Q96NS8 147 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 SDHCQ99643 169 aaPredicted RBP12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 SRRQ9GZT4 340 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 DOK5Q9P104 306 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 RABL2AQ9UBK7 228 aaPredicted RBP12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 EXTL2Q9UBQ6 330 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 RABL2BQ9UNT1 228 aa12.49□□□□□ -0.41
PDLIM4-202ENST00000379018 M0R2Z0 102 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 CTDSP2O14595 271 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 PFDN1O60925 122 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 SULT1A3P0DMM9 295 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 SULT1A4P0DMN0 295 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 CCL18P55774 89 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 LGI3Q8N145 548 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 IGF2BP2-AS1Q96M15 143 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 ABHD1Q96SE0 405 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 MIXL1Q9H2W2 232 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 SLC25A22Q9H936 323 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 MTFP1Q9UDX5 166 aa12.48□□□□□ -0.41
PDLIM4-202ENST00000379018 IGKV1D-37A0A075B6S9 117 aa12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 INSP01308 110 aa12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 TAS2R19P59542 299 aa12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 CLINT1Q14677 625 aa12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 STEAP1BQ6NZ63 245 aa12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 BAP18Q8IXM2 172 aa12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 DTD1Q8TEA8 209 aa12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 RTBDNQ9BSG5 229 aaPredicted RBP12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 PAIP2BQ9ULR5 123 aaKnown RBP12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 LINC00588Q9Y4M8 146 aa12.47□□□□□ -0.41
PDLIM4-202ENST00000379018 APOBP04114 4563 aaKnown RBP12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 LYRM9A8MSI8 78 aa12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 GABARAPH6UMI1 98 aa12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 GAMTQ14353 236 aa12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 C1orf194Q5T5A4 169 aa12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 IGFL4Q6B9Z1 124 aa12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 TMEM229BQ8NBD8 167 aa12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 OR4C16Q8NGL9 310 aa12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 RBKSQ9H477 322 aa12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 U3KQ87 197 aa12.46□□□□□ -0.41
PDLIM4-202ENST00000379018 SNRPGP15A8MWD9 76 aa12.45□□□□□ -0.42
PDLIM4-202ENST00000379018 FABP1P07148 127 aa12.45□□□□□ -0.42
PDLIM4-202ENST00000379018 ASAH1Q13510 395 aa12.45□□□□□ -0.42
PDLIM4-202ENST00000379018 AMTNQ6UX39 209 aa12.45□□□□□ -0.42
PDLIM4-202ENST00000379018 RSG1Q9BU20 258 aa12.45□□□□□ -0.42
PDLIM4-202ENST00000379018 SLC25A32Q9H2D1 315 aa12.45□□□□□ -0.42
PDLIM4-202ENST00000379018 TRAV12-2A0A075B6T6 113 aa12.44□□□□□ -0.42
PDLIM4-202ENST00000379018 CRYM-AS1A6NIL9 109 aa12.44□□□□□ -0.42
PDLIM4-202ENST00000379018 HTN1P15515 57 aa12.44□□□□□ -0.42
PDLIM4-202ENST00000379018 GALR1P47211 349 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms