RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 PATE2Q6UY27 113 aa12.09□□□□□ -0.47
CCDC107-204ENST00000378409 FAM213BQ8TBF2 198 aa12.09□□□□□ -0.47
CCDC107-204ENST00000378409 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
CCDC107-204ENST00000378409 TMEM190Q8WZ59 177 aa12.09□□□□□ -0.47
CCDC107-204ENST00000378409 TENM1Q9UKZ4 2725 aa12.09□□□□□ -0.47
CCDC107-204ENST00000378409 ELOA3CA0A087WX78 387 aaPredicted RBP12.08□□□□□ -0.48
CCDC107-204ENST00000378409 FHITP49789 147 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 RAB5CP51148 216 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 SYNJ2BPP57105 145 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 RHOBP62745 196 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 FAM78BQ5VT40 261 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 C12orf54Q6X4T0 127 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 C1QL4Q86Z23 238 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 C3orf56Q8N813 242 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 GATAD1Q8WUU5 269 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 UHRF2Q96PU4 802 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 SLC25A22Q9H936 323 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 RABAC1Q9UI14 185 aa12.08□□□□□ -0.48
CCDC107-204ENST00000378409 A0A1W2PPV4 95 aa12.07□□□□□ -0.48
CCDC107-204ENST00000378409 ZNF705EA8MWA4 302 aaPredicted RBP12.07□□□□□ -0.48
CCDC107-204ENST00000378409 CDC34P49427 236 aaPredicted RBP12.07□□□□□ -0.48
CCDC107-204ENST00000378409 FHL3Q13643 280 aa12.07□□□□□ -0.48
CCDC107-204ENST00000378409 LINC00305Q7Z4B0 112 aa12.07□□□□□ -0.48
CCDC107-204ENST00000378409 RPP25LQ8N5L8 163 aaKnown RBP12.07□□□□□ -0.48
CCDC107-204ENST00000378409 RNF141Q8WVD5 230 aa12.07□□□□□ -0.48
CCDC107-204ENST00000378409 METTL26Q96S19 204 aa12.07□□□□□ -0.48
CCDC107-204ENST00000378409 RNF2Q99496 336 aa12.07□□□□□ -0.48
CCDC107-204ENST00000378409 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
CCDC107-204ENST00000378409 SEPSECSQ9HD40 501 aaKnown RBP12.07□□□□□ -0.48
CCDC107-204ENST00000378409 MRPL27Q9P0M9 148 aaKnown RBP12.07□□□□□ -0.48
CCDC107-204ENST00000378409 EIF3GO75821 320 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC107-204ENST00000378409 KLF5Q13887 457 aaPredicted RBP12.06□□□□□ -0.48
CCDC107-204ENST00000378409 SPATA31B1PQ5VZV4 182 aa12.06□□□□□ -0.48
CCDC107-204ENST00000378409 DPPA3Q6W0C5 159 aa12.06□□□□□ -0.48
CCDC107-204ENST00000378409 REC114Q7Z4M0 266 aa12.06□□□□□ -0.48
CCDC107-204ENST00000378409 ZNF747Q9BV97 191 aa12.06□□□□□ -0.48
CCDC107-204ENST00000378409 MRPL32Q9BYC8 188 aaKnown RBP12.06□□□□□ -0.48
CCDC107-204ENST00000378409 SLC25A39Q9BZJ4 359 aaPredicted RBP12.06□□□□□ -0.48
CCDC107-204ENST00000378409 FUT9Q9Y231 359 aa12.06□□□□□ -0.48
CCDC107-204ENST00000378409 UFC1Q9Y3C8 167 aa12.06□□□□□ -0.48
CCDC107-204ENST00000378409 FBN1P35555 2871 aaKnown RBP12.05□□□□□ -0.48
CCDC107-204ENST00000378409 IGHV3-49A0A0A0MS15 119 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 CTXND1A0A1B0GTU2 59 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 SEC14L6B5MCN3 397 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 LGALS9O00182 355 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 HMGB3O15347 200 aaKnown RBP12.05□□□□□ -0.48
CCDC107-204ENST00000378409 NPPCP23582 126 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 MYCNOSP40205 109 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 TM4SF20Q53R12 229 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 MORN5Q5VZ52 161 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 MIR17HGQ75NE6 70 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 SSX7Q7RTT5 188 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 S100A7AQ86SG5 101 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 PCNPQ8WW12 178 aaKnown RBP12.05□□□□□ -0.48
CCDC107-204ENST00000378409 DLX4Q92988 240 aaPredicted RBP12.05□□□□□ -0.48
CCDC107-204ENST00000378409 RAB24Q969Q5 203 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 SHANK2-AS3Q9BTD1 123 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 SCRT1Q9BWW7 348 aa12.05□□□□□ -0.48
CCDC107-204ENST00000378409 DAZ1Q9NQZ3 744 aaKnown RBP12.05□□□□□ -0.48
CCDC107-204ENST00000378409 IGHV3OR16-13A0A075B7E8 117 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 IGHV3-74A0A0B4J1X5 117 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 H3BRN7 92 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 PF4P02776 101 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 CRYBB3P26998 211 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 S100A7P31151 101 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 ZNF726P1Q15940 193 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 LEMD1Q68G75 181 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 LRRC20Q8TCA0 184 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 NARS2Q96I59 477 aaKnown RBP12.04□□□□□ -0.48
CCDC107-204ENST00000378409 PFDN2Q9UHV9 154 aa12.04□□□□□ -0.48
CCDC107-204ENST00000378409 IGHV3-66A0A0C4DH42 116 aa12.03□□□□□ -0.48
CCDC107-204ENST00000378409 ZNF98A6NK75 572 aa12.03□□□□□ -0.48
CCDC107-204ENST00000378409 A8MWP6 167 aa12.03□□□□□ -0.48
CCDC107-204ENST00000378409 K7EMT4 169 aa12.03□□□□□ -0.48
CCDC107-204ENST00000378409 APOHP02749 345 aaPredicted RBP12.03□□□□□ -0.48
CCDC107-204ENST00000378409 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
CCDC107-204ENST00000378409 LCN15Q6UWW0 184 aa12.03□□□□□ -0.48
CCDC107-204ENST00000378409 OR4F17Q8NGA8 305 aa12.03□□□□□ -0.48
CCDC107-204ENST00000378409 OR4F4Q96R69 305 aa12.03□□□□□ -0.48
CCDC107-204ENST00000378409 PEMTQ9UBM1 199 aa12.03□□□□□ -0.48
CCDC107-204ENST00000378409 IGHV7-4-1A0A0J9YVY3 117 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 A0A1B0GV50 99 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 TMEM213A2RRL7 107 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 MAP1LC3B2A6NCE7 125 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 C8orf88P0DMB2 117 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 EDN2P20800 178 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 TAS2R45P59539 299 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 RAB14P61106 215 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 BLOC1S1P78537 153 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 SHISA2Q6UWI4 295 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 OR9G4Q8NGQ1 327 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 SFT2D1Q8WV19 159 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 SAT2Q96F10 170 aaPredicted RBP12.02□□□□□ -0.49
CCDC107-204ENST00000378409 SLC25A2Q9BXI2 301 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 MAP1LC3BQ9GZQ8 125 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 TECRQ9NZ01 308 aaKnown RBP12.02□□□□□ -0.49
CCDC107-204ENST00000378409 U3KQE9 123 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 COL6A5A8TX70 2615 aa12.02□□□□□ -0.49
CCDC107-204ENST00000378409 C2orf70A6NJV1 201 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms