RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 OR5C1Q8NGR4 320 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 CHAC2Q8WUX2 184 aa9.93□□□□□ -0.82
CKAP2-202ENST00000378034 IGHV3-66A0A0C4DH42 116 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 A8MZ25 164 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 AGPAT2O15120 278 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 CMC4P56277 68 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-202ENST00000378034 TMEM182Q6ZP80 229 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-202ENST00000378034 GLMPQ8WWB7 406 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 FBXL17Q9UF56 701 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 HSPB11Q9Y547 144 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 LINC00869P0C866 280 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 GATA2P23769 480 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-202ENST00000378034 CAMLGP49069 296 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 MGST2Q99735 147 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 FAM110AQ9BQ89 295 aa9.92□□□□□ -0.82
CKAP2-202ENST00000378034 UBE2L5PA0A1B0GUS4 154 aa9.91□□□□□ -0.82
CKAP2-202ENST00000378034 HYPMO75409 117 aa9.91□□□□□ -0.82
CKAP2-202ENST00000378034 CD7P09564 240 aa9.91□□□□□ -0.82
CKAP2-202ENST00000378034 ORM2P19652 201 aa9.91□□□□□ -0.82
CKAP2-202ENST00000378034 RPL11P62913 178 aaKnown RBP9.91□□□□□ -0.82
CKAP2-202ENST00000378034 OR1B1Q8NGR6 318 aa9.91□□□□□ -0.82
CKAP2-202ENST00000378034 RNF24Q9Y225 148 aa9.91□□□□□ -0.82
CKAP2-202ENST00000378034 MS4A6AQ9H2W1 248 aa9.9□□□□□ -0.82
CKAP2-202ENST00000378034 DNASE2O00115 360 aaPredicted RBP9.9□□□□□ -0.83
CKAP2-202ENST00000378034 FGF7P21781 194 aa9.9□□□□□ -0.83
CKAP2-202ENST00000378034 RPL29P47914 159 aaKnown RBP9.9□□□□□ -0.83
CKAP2-202ENST00000378034 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.83
CKAP2-202ENST00000378034 OR2T35Q8NGX2 323 aa9.9□□□□□ -0.83
CKAP2-202ENST00000378034 ATP5SQ99766 215 aa9.9□□□□□ -0.83
CKAP2-202ENST00000378034 GGTLC1Q9BX51 225 aa9.9□□□□□ -0.83
CKAP2-202ENST00000378034 HIGD1AQ9Y241 93 aa9.9□□□□□ -0.83
CKAP2-202ENST00000378034 OR11H12B2RN74 326 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 IGHV4-30-4P0DP06 118 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 PRR20EP86478 221 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 PRR20CP86479 221 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 PRR20DP86480 221 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 PRR20BP86481 221 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 PRR20AP86496 221 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 CLINT1Q14677 625 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 OPCMLQ14982 345 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 Q6ZRG5 221 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 STPG3Q8N7X2 389 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 GPR82Q96P67 336 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 AQP10Q96PS8 301 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 B9D2Q9BPU9 175 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 ARL6Q9H0F7 186 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
CKAP2-202ENST00000378034 IGKV3-7A0A075B6H7 116 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 ELOA3CA0A087WX78 387 aaPredicted RBP9.88□□□□□ -0.83
CKAP2-202ENST00000378034 ZNF98A6NK75 572 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 OR8I2Q8N0Y5 310 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 GBGT1Q8N5D6 347 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
CKAP2-202ENST00000378034 TUBA4BQ9H853 241 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 KCNIP2Q9NS61 270 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 H3BRN7 92 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 K7EQG2 157 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 OR5G3P0C626 314 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 TFPI2P48307 235 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 Q5BKY6 102 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 STXBP6Q8NFX7 210 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 SHANK2-AS3Q9BTD1 123 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 NPCDR1Q9BY65 106 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 PARD6GQ9BYG4 376 aaPredicted RBP9.88□□□□□ -0.83
CKAP2-202ENST00000378034 WDR61Q9GZS3 305 aaKnown RBP9.88□□□□□ -0.83
CKAP2-202ENST00000378034 SEPSECSQ9HD40 501 aaKnown RBP9.88□□□□□ -0.83
CKAP2-202ENST00000378034 NRN1Q9NPD7 142 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 DOK5Q9P104 306 aa9.88□□□□□ -0.83
CKAP2-202ENST00000378034 IFNA5P01569 189 aa9.87□□□□□ -0.83
CKAP2-202ENST00000378034 FRMD6-AS1P0C7T7 363 aa9.87□□□□□ -0.83
CKAP2-202ENST00000378034 MIC13Q5XKP0 118 aa9.87□□□□□ -0.83
CKAP2-202ENST00000378034 ZNF709Q8N972 641 aa9.87□□□□□ -0.83
CKAP2-202ENST00000378034 INO80EQ8NBZ0 244 aaPredicted RBP9.87□□□□□ -0.83
CKAP2-202ENST00000378034 OR1L4Q8NGR5 311 aa9.87□□□□□ -0.83
CKAP2-202ENST00000378034 DCANP1Q8TF63 244 aa9.87□□□□□ -0.83
CKAP2-202ENST00000378034 PFDN5Q99471 154 aa9.87□□□□□ -0.83
CKAP2-202ENST00000378034 ARV1Q9H2C2 271 aa9.87□□□□□ -0.83
CKAP2-202ENST00000378034 SLC39A9Q9NUM3 307 aa9.87□□□□□ -0.83
CKAP2-202ENST00000378034 C17orf112F2Z3M2 114 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 COX7A2P2O60397 106 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 GALR1P47211 349 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 B2MP61769 119 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 ODF3L2Q3SX64 289 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 SAMD13Q5VXD3 122 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 PATE2Q6UY27 113 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 WFDC3Q8IUB2 231 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 DEFB125Q8N687 156 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 DNAJC4Q9NNZ3 241 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 PXMP4Q9Y6I8 212 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 C10orf113Q5VZT2 155 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 SCGB1C1Q8TD33 95 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 SRD5A3Q9H8P0 318 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 SLC25A22Q9H936 323 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 TNFSF18Q9UNG2 199 aa9.86□□□□□ -0.83
CKAP2-202ENST00000378034 FXYD6-FXYD2A0A087WZ82 144 aa9.85□□□□□ -0.83
CKAP2-202ENST00000378034 NHLRC4P0CG21 123 aaPredicted RBP9.85□□□□□ -0.83
CKAP2-202ENST00000378034 RPL7P18124 248 aaKnown RBP9.85□□□□□ -0.83
CKAP2-202ENST00000378034 MEOX2P50222 304 aa9.85□□□□□ -0.83
CKAP2-202ENST00000378034 TMEM37Q8WXS4 190 aa9.85□□□□□ -0.83
CKAP2-202ENST00000378034 SCRT1Q9BWW7 348 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms