RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MLANAQ16655 118 aa9.46□□□□□ -0.9
PTCH1-203ENST00000375274 PLXNA2O75051 1894 aa9.45□□□□□ -0.9
PTCH1-203ENST00000375274 PRB4P10163 310 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-203ENST00000375274 KIR3DL3Q8N743 410 aa9.45□□□□□ -0.9
PTCH1-203ENST00000375274 ZNF418Q8TF45 676 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-203ENST00000375274 SCRT1Q9BWW7 348 aa9.45□□□□□ -0.9
PTCH1-203ENST00000375274 IGHV3OR16-12A0A075B7B8 117 aa9.45□□□□□ -0.9
PTCH1-203ENST00000375274 FAM71F2Q6NXP2 309 aa9.45□□□□□ -0.9
PTCH1-203ENST00000375274 DPM2O94777 84 aa9.45□□□□□ -0.9
PTCH1-203ENST00000375274 ATP5J2P56134 94 aa9.45□□□□□ -0.9
PTCH1-203ENST00000375274 LINC00479Q96M42 142 aa9.45□□□□□ -0.9
PTCH1-203ENST00000375274 TRGV9Q99603 122 aa9.45□□□□□ -0.9
PTCH1-203ENST00000375274 SLC25A39Q9BZJ4 359 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-203ENST00000375274 A0A1B0GV72 72 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 MPV17L2Q567V2 206 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 RNF166Q96A37 237 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-203ENST00000375274 TRAV8-1A0A0A6YYK1 113 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 IGKV1-16P04430 117 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 RNASE2P10153 161 aaKnown RBP9.44□□□□□ -0.9
PTCH1-203ENST00000375274 TTC32Q5I0X7 151 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 POLR3KQ9Y2Y1 108 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-203ENST00000375274 FNDC10F2Z333 226 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 TDGF1P3P51864 188 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 Q0VG73 95 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 PIMREGQ9BSJ6 248 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 A0A1B0GWJ7 208 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 hDV102S1A0JD36 115 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 H0YJW9 148 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 LMO1P25800 156 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 PDLIM4P50479 330 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 HSD52Q0P140 79 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 VKORC1Q9BQB6 163 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 C20orf144Q9BQM9 153 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 PROK2Q9HC23 129 aa9.44□□□□□ -0.9
PTCH1-203ENST00000375274 A0A0G2JLM5 398 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-203ENST00000375274 IGLV3-1P01715 115 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 IGHV1-8P0DP01 117 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
PTCH1-203ENST00000375274 MTURNQ8N3F0 131 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 RHOGP84095 191 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-203ENST00000375274 RAX2Q96IS3 184 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 IGHV2-26A0A0B4J1V2 119 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 MEIG1Q5JSS6 88 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 LYPD6BQ8NI32 183 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 SNHG12Q9BXW3 62 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 ARFGEF3Q5TH69 2177 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 D6R8Y8 96 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 SYS1-DBNDD2H3BUS1 97 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 H7C1H1 209 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 OR9G4Q8NGQ1 327 aa9.43□□□□□ -0.9
PTCH1-203ENST00000375274 F2Z2F3 143 aa9.42□□□□□ -0.9
PTCH1-203ENST00000375274 EVI2AP22794 236 aa9.42□□□□□ -0.9
PTCH1-203ENST00000375274 SRSF1Q07955 248 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTCH1-203ENST00000375274 OR5A1Q8NGJ0 315 aa9.42□□□□□ -0.9
PTCH1-203ENST00000375274 TMEM178BH3BS89 294 aa9.42□□□□□ -0.9
PTCH1-203ENST00000375274 IGHV3-11P01762 117 aa9.42□□□□□ -0.9
PTCH1-203ENST00000375274 KLRB1Q12918 225 aa9.42□□□□□ -0.9
PTCH1-203ENST00000375274 SFTA2Q6UW10 78 aa9.42□□□□□ -0.9
PTCH1-203ENST00000375274 ZNF138P52744 262 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 CYYR1Q96J86 154 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 NCR2O95944 276 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 IGKCP01834 107 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 GAFA1Q96PS6 74 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 IGHV1-3A0A0C4DH29 117 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 ITGB1BP1O14713 200 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 UBE2L6O14933 153 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 SUMO2P61956 95 aaKnown RBP9.41□□□□□ -0.9
PTCH1-203ENST00000375274 LYZL1Q6UWQ5 148 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 TMEM190Q8WZ59 177 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 NAA38Q9BRA0 125 aaKnown RBP9.41□□□□□ -0.9
PTCH1-203ENST00000375274 IGKV2-40A0A087WW87 121 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-203ENST00000375274 A0A087X0K7 114 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 IGKV2D-40P01614 121 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-203ENST00000375274 WNT2P09544 360 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 UBE2V1Q13404 147 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 GUSBP1Q15486 140 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 HAPLN4Q86UW8 402 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 SELENOKQ9Y6D0 94 aa9.41□□□□□ -0.9
PTCH1-203ENST00000375274 RNASE4P34096 147 aaKnown RBP9.4□□□□□ -0.9
PTCH1-203ENST00000375274 CDKN1AP38936 164 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 KLF17Q5JT82 389 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-203ENST00000375274 COPS9Q8WXC6 57 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 TNFRSF18Q9Y5U5 241 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 YPEL3P61236 119 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-203ENST00000375274 ERVK11-1P61568 191 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 RRN3P1Q2M238 152 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 ORMDL2Q53FV1 153 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 RPRMLQ8N4K4 120 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 MRAP2Q96G30 205 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 ZNF479Q96JC4 524 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 DUX5Q96PT3 197 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 PCNX2A6NKB5 2137 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 SPG11Q96JI7 2443 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 TRAV21A0A0B4J279 112 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 PSMB11A5LHX3 300 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 IGHG3P01860 377 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms