RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 AURKAIP1Q9NWT8 199 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 FBXL7Q9UJT9 491 aa14.1□□□□□ -0.15
HLA-DQB1-201ENST00000374943 K7EN84 100 aa14.09□□□□□ -0.15
HLA-DQB1-201ENST00000374943 GGCTO75223 188 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB1-201ENST00000374943 TAS2R60P59551 318 aa14.09□□□□□ -0.15
HLA-DQB1-201ENST00000374943 ECSCRQ19T08 205 aa14.09□□□□□ -0.15
HLA-DQB1-201ENST00000374943 Q56UQ5 140 aa14.09□□□□□ -0.15
HLA-DQB1-201ENST00000374943 S100A7AQ86SG5 101 aa14.09□□□□□ -0.15
HLA-DQB1-201ENST00000374943 LRRC75A-AS1Q8N1F1 130 aa14.09□□□□□ -0.15
HLA-DQB1-201ENST00000374943 IGF2BP2-AS1Q96M15 143 aa14.09□□□□□ -0.15
HLA-DQB1-201ENST00000374943 CDC42EP3Q9UKI2 254 aa14.09□□□□□ -0.15
HLA-DQB1-201ENST00000374943 J3QLI3 93 aa14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 PEX7O00628 323 aa14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 AMY1AP04745 511 aa14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 IL4P05112 153 aa14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 LOXL1Q08397 574 aaPredicted RBP14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 C19orf54Q5BKX5 351 aa14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 KCNIP4Q6PIL6 250 aa14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 ZNF600Q6ZNG1 722 aa14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 TMEM219Q86XT9 240 aa14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 S4R3C0 116 aa14.08□□□□□ -0.16
HLA-DQB1-201ENST00000374943 A6NDX4 124 aa14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 LEMD1Q68G75 181 aa14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 NECAP1Q8NC96 275 aa14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 OR10G8Q8NGN5 311 aa14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 AVPP01185 164 aa14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 HIST1H1EP10412 219 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 CNN1P51911 297 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 KRTAP10-9P60411 292 aa14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 ZNF502Q8TBZ5 544 aa14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 RNF24Q9Y225 148 aa14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 TEX15Q9BXT5 2789 aa14.07□□□□□ -0.16
HLA-DQB1-201ENST00000374943 LINC01548A6NM66 108 aa14.06□□□□□ -0.16
HLA-DQB1-201ENST00000374943 CTSGP08311 255 aa14.06□□□□□ -0.16
HLA-DQB1-201ENST00000374943 RANP62826 216 aaKnown RBP14.06□□□□□ -0.16
HLA-DQB1-201ENST00000374943 FOXL1Q12952 345 aa14.06□□□□□ -0.16
HLA-DQB1-201ENST00000374943 DEFB113Q30KQ7 82 aa14.06□□□□□ -0.16
HLA-DQB1-201ENST00000374943 BLNKQ8WV28 456 aa14.06□□□□□ -0.16
HLA-DQB1-201ENST00000374943 BTF3L4Q96K17 158 aa14.06□□□□□ -0.16
HLA-DQB1-201ENST00000374943 SAV1Q9H4B6 383 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB1-201ENST00000374943 SRD5A3Q9H8P0 318 aa14.06□□□□□ -0.16
HLA-DQB1-201ENST00000374943 SH2D7A6NKC9 451 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 M0QZK8 103 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 GCGP01275 180 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 IGLV2-8P01709 118 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 TYMSP04818 313 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 HNF1AP20823 631 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 RHOGP84095 191 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 USF2Q15853 346 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 C15orf32Q32M92 178 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 BPIFA4PQ86YQ2 179 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 C5orf17Q8NAS9 161 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 GAR1Q9NY12 217 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 EPDR1Q9UM22 224 aa14.05□□□□□ -0.16
HLA-DQB1-201ENST00000374943 C5orf52A6NGY3 159 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 OR2T8A6NH00 312 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 G3V318 75 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 H3BUX3 64 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 S100A6P06703 90 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 COL8A1P27658 744 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 Q9H3A6 140 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 ZNF586Q9NXT0 402 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 PITPNC1Q9UKF7 332 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 KLF12Q9Y4X4 402 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 TRAV41A0A0B4J266 112 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 PGPA6NDG6 321 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 MRPS12O15235 138 aaKnown RBP14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 IGF1P05019 195 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 SLC25A5P05141 298 aaKnown RBP14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 IGLC2P0DOY2 106 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 TMEM183BQ1AE95 376 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 ATP6V0BQ99437 205 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 OSTCQ9NRP0 149 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 SOX21Q9Y651 276 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 SVEP1Q4LDE5 3571 aa14.04□□□□□ -0.16
HLA-DQB1-201ENST00000374943 PRRC2AP48634 2157 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 CENPEQ02224 2701 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 TRAV9-1A0A075B6T8 112 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 A0A1W2PPQ1 181 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 ZNF98A6NK75 572 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 PHOX2AO14813 284 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 IGHV3-23P01764 117 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 TRGC2P03986 189 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 S100A9P06702 114 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 ADMP35318 185 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 OR4F17Q8NGA8 305 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 SMIM12Q96EX1 92 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 ATG101Q9BSB4 218 aa14.03□□□□□ -0.16
HLA-DQB1-201ENST00000374943 POLQO75417 2590 aa14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 PPP5D1E7EU14 171 aa14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 UBE2CO00762 179 aa14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 ISLRO14498 428 aa14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 BRI3O95415 125 aa14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 FAM3BP58499 235 aaPredicted RBP14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 SNRPEP62304 92 aaKnown RBP14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 EEF1AKMT3Q96AZ1 226 aa14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 CHRDL1Q9BU40 450 aa14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 IL36BQ9NZH7 164 aa14.02□□□□□ -0.16
HLA-DQB1-201ENST00000374943 TRBV19A0A075B6N1 114 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms