RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 TMEM14CQ9P0S9 112 aa14.35□□□□□ -0.11
PHF1-201ENST00000374512 NAV3Q8IVL0 2385 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 NPSP0C0P6 89 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 TSPOP30536 169 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 HCP5Q6MZN7 132 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 EBLN2Q6P2I7 272 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 RBPMS2Q6ZRY4 209 aaKnown RBP14.34□□□□□ -0.11
PHF1-201ENST00000374512 RITA1Q96K30 269 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 SSBP4Q9BWG4 385 aaPredicted RBP14.34□□□□□ -0.11
PHF1-201ENST00000374512 Q9H3A6 140 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 OTORQ9NRC9 128 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 ROS1P08922 2347 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 CRXO43186 299 aaPredicted RBP14.34□□□□□ -0.11
PHF1-201ENST00000374512 OR2D3Q8NGH3 330 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 TMEM70Q9BUB7 260 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 HIGD1AQ9Y241 93 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 F11RQ9Y624 299 aaKnown RBP14.34□□□□□ -0.11
PHF1-201ENST00000374512 SPTBN2O15020 2390 aa14.34□□□□□ -0.11
PHF1-201ENST00000374512 PCNX1Q96RV3 2341 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 TRBV6-1A0A0K0K1D8 114 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 NPIPB6E9PJ23 425 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 GPR6P46095 362 aaPredicted RBP14.33□□□□□ -0.12
PHF1-201ENST00000374512 ASPHD1Q5U4P2 390 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 C11orf42Q8N5U0 333 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 SIGLEC9Q9Y336 463 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 IGHV2-26A0A0B4J1V2 119 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 NDFIP1Q9BT67 221 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 RNF24Q9Y225 148 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 BSNQ9UPA5 3926 aa14.33□□□□□ -0.12
PHF1-201ENST00000374512 SHISA9B4DS77 424 aa14.32□□□□□ -0.12
PHF1-201ENST00000374512 LCN12Q6JVE5 192 aa14.32□□□□□ -0.12
PHF1-201ENST00000374512 TCF24Q7RTU0 167 aa14.32□□□□□ -0.12
PHF1-201ENST00000374512 STPG4Q8N801 248 aa14.32□□□□□ -0.12
PHF1-201ENST00000374512 GTSF1Q8WW33 167 aa14.32□□□□□ -0.12
PHF1-201ENST00000374512 SRSF8Q9BRL6 282 aaKnown RBP14.32□□□□□ -0.12
PHF1-201ENST00000374512 ORAOV1Q8WV07 137 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 RNF5Q99942 180 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 E7EQL1 145 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 IGLV1-47P01700 117 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 OR5AL1P0C617 328 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 FAM87AP0C7U9 286 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 RBPJQ06330 500 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 PRR30Q53SZ7 412 aaPredicted RBP14.31□□□□□ -0.12
PHF1-201ENST00000374512 Q56UQ5 140 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 RUSC1-AS1Q66K80 236 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 LINC00322Q6ZN03 302 aaPredicted RBP14.31□□□□□ -0.12
PHF1-201ENST00000374512 PPP1R27Q86WC6 154 aa14.31□□□□□ -0.12
PHF1-201ENST00000374512 TFPI2P48307 235 aa14.3□□□□□ -0.12
PHF1-201ENST00000374512 URB1-AS1Q96HZ7 61 aa14.3□□□□□ -0.12
PHF1-201ENST00000374512 RPH3ALQ9UNE2 315 aa14.3□□□□□ -0.12
PHF1-201ENST00000374512 INSIG2Q9Y5U4 225 aa14.3□□□□□ -0.12
PHF1-201ENST00000374512 RBP4P02753 201 aa14.3□□□□□ -0.12
PHF1-201ENST00000374512 HOXB4P17483 251 aaPredicted RBP14.3□□□□□ -0.12
PHF1-201ENST00000374512 FOXA3P55318 350 aaPredicted RBP14.3□□□□□ -0.12
PHF1-201ENST00000374512 Q86TA4 180 aa14.3□□□□□ -0.12
PHF1-201ENST00000374512 ATOH7Q8N100 152 aa14.3□□□□□ -0.12
PHF1-201ENST00000374512 PKDREJQ9NTG1 2253 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 TEX22C9J3V5 150 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 HAX1O00165 279 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 PGLYRP4Q96LB8 373 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 SGK494Q96LW2 274 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 ST20Q9HBF5 79 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 RALYQ9UKM9 306 aaKnown RBP14.29□□□□□ -0.12
PHF1-201ENST00000374512 ARFGEF3Q5TH69 2177 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 IGHV3-72A0A0B4J1Y9 119 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 IGHV1-3A0A0C4DH29 117 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 IGHV1-69-2A0A0G2JMI3 117 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 IGLC1P0CG04 106 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 C16orf54Q6UWD8 224 aa14.29□□□□□ -0.12
PHF1-201ENST00000374512 LOC102724200A0A096LPH7 203 aaPredicted RBP14.28□□□□□ -0.12
PHF1-201ENST00000374512 BUB1B-PAK6H3BSN5 160 aa14.28□□□□□ -0.12
PHF1-201ENST00000374512 SIAH2O43255 324 aa14.28□□□□□ -0.12
PHF1-201ENST00000374512 PSG1P11464 419 aa14.28□□□□□ -0.12
PHF1-201ENST00000374512 IGLL1P15814 213 aa14.28□□□□□ -0.12
PHF1-201ENST00000374512 COL8A1P27658 744 aa14.28□□□□□ -0.12
PHF1-201ENST00000374512 APOBEC3AP31941 199 aaPredicted RBP14.28□□□□□ -0.12
PHF1-201ENST00000374512 FAM120AOSQ5T036 256 aa14.28□□□□□ -0.12
PHF1-201ENST00000374512 SLC25A39Q9BZJ4 359 aaPredicted RBP14.28□□□□□ -0.12
PHF1-201ENST00000374512 CHEK1O14757 476 aa14.27□□□□□ -0.12
PHF1-201ENST00000374512 NDUFB8O95169 186 aa14.27□□□□□ -0.12
PHF1-201ENST00000374512 MAJINQ3KP22 176 aa14.27□□□□□ -0.12
PHF1-201ENST00000374512 ATMQ13315 3056 aa14.27□□□□□ -0.13
PHF1-201ENST00000374512 LIPFP07098 398 aa14.27□□□□□ -0.13
PHF1-201ENST00000374512 LYPD1Q8N2G4 141 aa14.27□□□□□ -0.13
PHF1-201ENST00000374512 MUC15Q8N387 334 aa14.27□□□□□ -0.13
PHF1-201ENST00000374512 RASL11BQ9BPW5 248 aa14.27□□□□□ -0.13
PHF1-201ENST00000374512 VKORC1Q9BQB6 163 aa14.27□□□□□ -0.13
PHF1-201ENST00000374512 MSRB2Q9Y3D2 182 aa14.27□□□□□ -0.13
PHF1-201ENST00000374512 IGHV1-24A0A0C4DH33 117 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 A0A1B0GW15 77 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 B9A039 149 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 SYS1-DBNDD2H3BUS1 97 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 I3L2K1 104 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 LEPROTL1O95214 131 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 LYZP61626 148 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.26□□□□□ -0.13
PHF1-201ENST00000374512 IGLV2-11P01706 119 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 CNTFRP26992 372 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 LEMD1Q68G75 181 aa14.26□□□□□ -0.13
PHF1-201ENST00000374512 OR4F17Q8NGA8 305 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms