RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 IGF2BP2-AS1Q96M15 143 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 TEP1Q99973 2627 aaKnown RBP9.58□□□□□ -0.88
HMGCL-202ENST00000374487 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
HMGCL-202ENST00000374487 SMAD7O15105 426 aaKnown RBP9.58□□□□□ -0.88
HMGCL-202ENST00000374487 IGLC1P0CG04 106 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 PDLIM4P50479 330 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
HMGCL-202ENST00000374487 BAGE2Q86Y30 109 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 OR1L6Q8NGR2 347 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 FAM103A1Q9BTL3 118 aaKnown RBP9.58□□□□□ -0.88
HMGCL-202ENST00000374487 HIGD1AQ9Y241 93 aa9.58□□□□□ -0.88
HMGCL-202ENST00000374487 TRAV34A0A0B4J273 112 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 PGPA6NDG6 321 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 IGLV2-8P01709 118 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 AMBPP02760 352 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 SLC25A5P05141 298 aaKnown RBP9.57□□□□□ -0.88
HMGCL-202ENST00000374487 RD3LP0DJH9 198 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 HIST1H1BP16401 226 aaKnown RBP9.57□□□□□ -0.88
HMGCL-202ENST00000374487 CBLN1P23435 193 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 ZFP36P26651 326 aaKnown RBP9.57□□□□□ -0.88
HMGCL-202ENST00000374487 PLP1P60201 277 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 LEMD1Q68G75 181 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 Q71RC1 249 aaPredicted RBP9.57□□□□□ -0.88
HMGCL-202ENST00000374487 KIR3DL3Q8N743 410 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 ACANP16112 2415 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 ZNF705GA8MUZ8 300 aaPredicted RBP9.57□□□□□ -0.88
HMGCL-202ENST00000374487 NDUFA3O95167 84 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 F8P00451 2351 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 IER3P46695 156 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 EFNA4P52798 201 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 UBE2G1P62253 170 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 C5orf64Q2M2E5 130 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 TMEM18Q96B42 140 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 EPDR1Q9UM22 224 aa9.57□□□□□ -0.88
HMGCL-202ENST00000374487 ARHGAP32A7KAX9 2087 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 SPINK4O60575 86 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 ADMP35318 185 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 TCL1AP56279 114 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 GNG5P63218 68 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 MRPL18Q9H0U6 180 aaKnown RBP9.56□□□□□ -0.88
HMGCL-202ENST00000374487 RPH3ALQ9UNE2 315 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 OOSP1A8MZH6 123 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 LINC00587B1AMM8 73 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 PAX1P15863 534 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 MINOS1Q5TGZ0 78 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 LRRC75A-AS1Q8N1F1 130 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 RBM14Q96PK6 669 aaKnown RBP9.56□□□□□ -0.88
HMGCL-202ENST00000374487 TMUB1Q9BVT8 246 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 MINOS1-NBL1R4GNA1 71 aa9.56□□□□□ -0.88
HMGCL-202ENST00000374487 IGHV4-30-2A0A087WSY4 118 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 SNURFLB1AK76 121 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 RNF223E7ERA6 249 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 K7EIM0 57 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 GP9P14770 177 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 HOXB4P17483 251 aaPredicted RBP9.55□□□□□ -0.88
HMGCL-202ENST00000374487 MYCNOSP40205 109 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 SLC35B1P78383 322 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 CX3CL1P78423 397 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 KLF17Q5JT82 389 aaPredicted RBP9.55□□□□□ -0.88
HMGCL-202ENST00000374487 CDPF1Q6NVV7 123 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 ZNF562Q6V9R5 426 aa9.55□□□□□ -0.88
HMGCL-202ENST00000374487 SLC25A39Q9BZJ4 359 aaPredicted RBP9.55□□□□□ -0.88
HMGCL-202ENST00000374487 FLNAP21333 2647 aaKnown RBP9.55□□□□□ -0.88
HMGCL-202ENST00000374487 TRBV9A0A0B4J1U6 114 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 H3BTX0 84 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 TOX4O94842 621 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 IGKV1-17P01599 117 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 TMEM183BQ1AE95 376 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 PRR27Q6MZM9 219 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 ZNF600Q6ZNG1 722 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 DYNAPQ8N1N2 210 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 ARPC1AQ92747 370 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 GNB1LQ9BYB4 327 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 ZANQ9Y493 2812 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 TMEM11P17152 192 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 RAB4BP61018 213 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 WDR73Q6P4I2 378 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 C5orf17Q8NAS9 161 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 SGK494Q96LW2 274 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 ATG101Q9BSB4 218 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 Q9H3A6 140 aa9.54□□□□□ -0.88
HMGCL-202ENST00000374487 SVEP1Q4LDE5 3571 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 SMIM27A0A1W2PRY6 76 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 GRIFINA4D1Z8 144 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 GATCO43716 136 aaKnown RBP9.53□□□□□ -0.88
HMGCL-202ENST00000374487 GNG7O60262 68 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
HMGCL-202ENST00000374487 CRISP2P16562 243 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 FBLN7Q53RD9 439 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 GBGT1Q8N5D6 347 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 SIRPDQ9H106 197 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 NAT8BQ9UHF3 227 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 IGHV2-70DA0A0C4DH43 119 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 MT-ND6P03923 174 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 FAM106CPP0CH98 169 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 JOSD1Q15040 202 aaPredicted RBP9.53□□□□□ -0.88
HMGCL-202ENST00000374487 COX19Q49B96 90 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 DNLZQ5SXM8 178 aa9.53□□□□□ -0.88
HMGCL-202ENST00000374487 TMEM256Q8N2U0 113 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms