RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 FOXA3P55318 350 aaPredicted RBP14□□□□□ -0.17
LDLRAP1-201ENST00000374338 OR52E5Q8NH55 327 aa14□□□□□ -0.17
LDLRAP1-201ENST00000374338 HSD17B10Q99714 261 aaKnown RBP14□□□□□ -0.17
LDLRAP1-201ENST00000374338 TMEM140Q9NV12 185 aa14□□□□□ -0.17
LDLRAP1-201ENST00000374338 A6NDN8 102 aa14□□□□□ -0.17
LDLRAP1-201ENST00000374338 SAA2P0DJI9 122 aaPredicted RBP14□□□□□ -0.17
LDLRAP1-201ENST00000374338 SSX8Q7RTT4 187 aa14□□□□□ -0.17
LDLRAP1-201ENST00000374338 NUP35Q8NFH5 326 aa14□□□□□ -0.17
LDLRAP1-201ENST00000374338 TSSC4Q9Y5U2 329 aaPredicted RBP14□□□□□ -0.17
LDLRAP1-201ENST00000374338 RAI1Q7Z5J4 1906 aaPredicted RBP13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 GAGE12HA6NDE8 117 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 IGKV1-16P04430 117 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 TCTAP57738 103 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 TNFAIP6P98066 277 aaPredicted RBP13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 KIR3DS1Q14943 382 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 S1PR3Q99500 378 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 CD300EQ496F6 205 aaPredicted RBP13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 CCDC144NLQ6NUI1 221 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 ZNF788Q6ZQV5 615 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 RAB37Q96AX2 223 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 HILPDAQ9Y5L2 63 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 CACNA1BQ00975 2339 aa13.99□□□□□ -0.17
LDLRAP1-201ENST00000374338 GGTLC3B5MD39 225 aa13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 C17orf58Q2M2W7 97 aa13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 PRR7Q8TB68 274 aa13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 FAM222BQ8WU58 562 aa13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 MBD3L4A6NDZ8 208 aaPredicted RBP13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 MBD3L3A6NE82 208 aaPredicted RBP13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 MBD3L5A6NJ08 208 aaPredicted RBP13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 MGST3O14880 152 aa13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 IGHV1-46P01743 117 aa13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 C1orf162Q8NEQ5 155 aaPredicted RBP13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 MBD3L2Q8NHZ7 208 aaPredicted RBP13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 H1FXQ92522 213 aaKnown RBP13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 CELSR1Q9NYQ6 3014 aa13.98□□□□□ -0.17
LDLRAP1-201ENST00000374338 A0A1W2PPM0 123 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 TMEM189A5PLL7 270 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 GFRA3O60609 400 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 CCL3L1P16619 93 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 ARHGAP32A7KAX9 2087 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 APELAP0DMC3 54 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 TCF15Q12870 199 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 ABHD17AQ96GS6 310 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 IGF2BP2-AS1Q96M15 143 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 MAP1LC3CQ9BXW4 147 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 VPS13CQ709C8 3753 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 A0A1W2PRE2 83 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 DIAPH2-AS1Q14236 149 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 FAM162BQ5T6X4 162 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 TRAT1Q6PIZ9 186 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 ZBTB34Q8NCN2 500 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 MBD6Q96DN6 1003 aa13.97□□□□□ -0.17
LDLRAP1-201ENST00000374338 CCL17Q92583 94 aa13.96□□□□□ -0.17
LDLRAP1-201ENST00000374338 ADH4P08319 380 aa13.96□□□□□ -0.18
LDLRAP1-201ENST00000374338 ZNF138P52744 262 aa13.96□□□□□ -0.18
LDLRAP1-201ENST00000374338 ZNF503Q96F45 646 aa13.96□□□□□ -0.18
LDLRAP1-201ENST00000374338 PRSS46E5RG02 174 aa13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 ZNF207O43670 478 aaKnown RBP13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 GLRXP35754 106 aa13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 TIMM23BQ5SRD1 257 aa13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 CHCHD1Q96BP2 118 aaKnown RBP13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 RABAC1Q9UI14 185 aa13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 MALRD1Q5VYJ5 2156 aa13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 DSCAML1Q8TD84 2053 aa13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 SRRM4A7MD48 611 aaKnown RBP13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 PRB4P10163 310 aaPredicted RBP13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 ERVK-16P61578 105 aa13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
LDLRAP1-201ENST00000374338 TRAV5A0A0B4J249 113 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 SERTM2A0A1B0GWG4 89 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 CD40P25942 277 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 MORN5Q5VZ52 161 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 LSM4Q9Y4Z0 139 aaKnown RBP13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 WNK2Q9Y3S1 2297 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 VWC2LB2RUY7 222 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 FGF6P10767 208 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 PLEKHA3Q9HB20 300 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 ANKHD1Q8IWZ3 2542 aaKnown RBP13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 VDAC2P45880 294 aaPredicted RBP13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 TEPPQ6URK8 271 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 IGFBPL1Q8WX77 278 aa13.94□□□□□ -0.18
LDLRAP1-201ENST00000374338 A0A0G2JNJ9 132 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 TMPRSS3P57727 454 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 TCTEX1D4Q5JR98 221 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 LINC01545Q5VT33 79 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 Q6ZS92 163 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 RNF7Q9UBF6 113 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 Q9UFV3 132 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 LIPFP07098 398 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 GAFA1Q96PS6 74 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 IDI2-AS1Q9NZ38 188 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 JPT1Q9UK76 154 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 ZNF257Q9Y2Q1 563 aa13.93□□□□□ -0.18
LDLRAP1-201ENST00000374338 K7EQM0 130 aa13.92□□□□□ -0.18
LDLRAP1-201ENST00000374338 LHBP01229 141 aa13.92□□□□□ -0.18
LDLRAP1-201ENST00000374338 GRAMD2BQ96HH9 432 aa13.92□□□□□ -0.18
LDLRAP1-201ENST00000374338 TMEM167BQ9NRX6 74 aa13.92□□□□□ -0.18
LDLRAP1-201ENST00000374338 HRNRQ86YZ3 2850 aaPredicted RBP13.92□□□□□ -0.18
LDLRAP1-201ENST00000374338 IGKV1OR2-108A0A075B7D4 117 aa13.92□□□□□ -0.18
LDLRAP1-201ENST00000374338 HIGD1CA8MV81 97 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms