RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 NOTCH2Q04721 2471 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 IGKV2D-26A0A0A0MRZ7 120 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 CFHR2P36980 270 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 CACNG7P62955 275 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 SAP25Q8TEE9 199 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 MLST8Q9BVC4 326 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 RPP21Q9H633 154 aaKnown RBP7.72□□□□□ -1.17
SF3A3-201ENST00000373019 PRRC2CQ9Y520 2896 aaKnown RBP7.71□□□□□ -1.17
SF3A3-201ENST00000373019 A0A0J9YW62 118 aa7.71□□□□□ -1.17
SF3A3-201ENST00000373019 hADV38S2A0JD32 116 aa7.71□□□□□ -1.17
SF3A3-201ENST00000373019 PEX7O00628 323 aa7.71□□□□□ -1.17
SF3A3-201ENST00000373019 DKK1O94907 266 aa7.71□□□□□ -1.17
SF3A3-201ENST00000373019 NGFP01138 241 aa7.71□□□□□ -1.17
SF3A3-201ENST00000373019 CLEC3BP05452 202 aa7.71□□□□□ -1.17
SF3A3-201ENST00000373019 FOXF2Q12947 444 aa7.71□□□□□ -1.17
SF3A3-201ENST00000373019 GLMPQ8WWB7 406 aa7.71□□□□□ -1.17
SF3A3-201ENST00000373019 SOX21Q9Y651 276 aaPredicted RBP7.71□□□□□ -1.17
SF3A3-201ENST00000373019 CHEK1O14757 476 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 DUX1O43812 170 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 APOMO95445 188 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 SMCPP49901 116 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-201ENST00000373019 Q6AWC8 147 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 LCNL1Q6ZST4 164 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 SRSF8Q9BRL6 282 aaKnown RBP7.71□□□□□ -1.18
SF3A3-201ENST00000373019 PRRG4Q9BZD6 226 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 HIGD1BQ9P298 99 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 PRRG2O14669 202 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 SS18L1O75177 396 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-201ENST00000373019 C8orf88P0DMB2 117 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 CSN1S1P47710 185 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 ERVK11-1P61568 191 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 C3AR1Q16581 482 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 TCF19Q9Y242 345 aa7.71□□□□□ -1.18
SF3A3-201ENST00000373019 C19orf71A6NCJ1 209 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 FAM90A27PA6NNH2 459 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 DSCR4P56555 118 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-201ENST00000373019 GNG5P63218 68 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 CHCHD2Q9Y6H1 151 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-201ENST00000373019 A0A1B0GW15 77 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 CDX4O14627 284 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-201ENST00000373019 PSPNO60542 156 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 PYYP10082 97 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 ZNF562Q6V9R5 426 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 RBPMS2Q6ZRY4 209 aaKnown RBP7.7□□□□□ -1.18
SF3A3-201ENST00000373019 TMEM178AQ8NBL3 297 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 CHAC1Q9BUX1 264 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 TRGV8A0A0C4DH27 118 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 A0A1B0GWB2 263 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 FCGR3BO75015 233 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 IFI27P40305 119 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-201ENST00000373019 PCBD1P61457 104 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 CEND1Q8N111 149 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 SLC25A45Q8N413 288 aa7.7□□□□□ -1.18
SF3A3-201ENST00000373019 FREM1Q5H8C1 2179 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 SDK2Q58EX2 2172 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 UBE2L3P68036 154 aaKnown RBP7.69□□□□□ -1.18
SF3A3-201ENST00000373019 CT83Q5H943 113 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 ABHD17BQ5VST6 288 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 RPRMLQ8N4K4 120 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 ITLN1Q8WWA0 313 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 PRELID3AQ96N28 172 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 DSPP15924 2871 aaKnown RBP7.69□□□□□ -1.18
SF3A3-201ENST00000373019 AGRNO00468 2067 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 ASPMQ8IZT6 3477 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 PRSS29PA6NIE9 313 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 HAX1O00165 279 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 CD59P13987 128 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 MYCNOSP40205 109 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 FXYD7P58549 80 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 PLXDC1Q8IUK5 500 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 DKK2Q9UBU2 259 aa7.69□□□□□ -1.18
SF3A3-201ENST00000373019 IGHV3-43A0A0B4J1X8 118 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 ZNF503-AS2A6NEH8 195 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 DEFB108AA8MXU0 73 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 IGHV3-43DP0DP04 118 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 GNG3P63215 75 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 PAX8Q06710 450 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 WDR86Q86TI4 376 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 GFRA4Q9GZZ7 299 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 RALYQ9UKM9 306 aaKnown RBP7.68□□□□□ -1.18
SF3A3-201ENST00000373019 TRBV25-1A0A075B6N4 114 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 MOSP00540 346 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 DIAPH2-AS1Q14236 149 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 MLANAQ16655 118 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 GUSBP11Q6P575 273 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 OR10X1Q8NGY0 326 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 PKIBQ9C010 78 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 HHLA3Q9XRX5 114 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 KLF12Q9Y4X4 402 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 RBP4P02753 201 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 ANXA2RQ3ZCQ2 193 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 PIFOQ8TCI5 191 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 RITA1Q96K30 269 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 DCHS1Q96JQ0 3298 aa7.68□□□□□ -1.18
SF3A3-201ENST00000373019 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.67□□□□□ -1.18
SF3A3-201ENST00000373019 MYOD1P15172 320 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 CFAP126Q5VTH2 177 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 ATP6V0E2Q8NHE4 81 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 PRSS3P2Q8NHM4 247 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 LILRA5A6NI73 299 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms