RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 WDR61Q9GZS3 305 aaKnown RBP12.34□□□□□ -0.43
TMEM53-203ENST00000372242 MFFQ9GZY8 342 aa12.34□□□□□ -0.43
TMEM53-203ENST00000372242 RABAC1Q9UI14 185 aa12.34□□□□□ -0.43
TMEM53-203ENST00000372242 TMA7Q9Y2S6 64 aaKnown RBP12.34□□□□□ -0.43
TMEM53-203ENST00000372242 LINC00862A6NCI5 91 aa12.33□□□□□ -0.44
TMEM53-203ENST00000372242 KRTAP10-11P60412 298 aa12.33□□□□□ -0.44
TMEM53-203ENST00000372242 STPG3Q8N7X2 389 aa12.33□□□□□ -0.44
TMEM53-203ENST00000372242 OR1B1Q8NGR6 318 aa12.33□□□□□ -0.44
TMEM53-203ENST00000372242 RNF2Q99496 336 aa12.33□□□□□ -0.44
TMEM53-203ENST00000372242 ARL6Q9H0F7 186 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 TECRQ9NZ01 308 aaKnown RBP12.32□□□□□ -0.44
TMEM53-203ENST00000372242 MPDU1O75352 247 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 CFDP00746 253 aaPredicted RBP12.32□□□□□ -0.44
TMEM53-203ENST00000372242 IFNA7P01567 189 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 IFNA5P01569 189 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 OPCMLQ14982 345 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 BEAN1Q3B7T3 259 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 SMUG1Q53HV7 270 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 TMEM61Q8N0U2 210 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 CITED4Q96RK1 184 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 U3KQE9 123 aa12.32□□□□□ -0.44
TMEM53-203ENST00000372242 HMSDA8MTL9 139 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 OR5G3P0C626 314 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 PRR20EP86478 221 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 PRR20CP86479 221 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 PRR20DP86480 221 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 PRR20BP86481 221 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 PRR20AP86496 221 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 EGFEM1PQ0D2K5 195 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 RSG1Q9BU20 258 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 RFNGQ9Y644 331 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 PXMP4Q9Y6I8 212 aa12.31□□□□□ -0.44
TMEM53-203ENST00000372242 LOC105371267A0A1B0GV96 52 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 HYPMO75409 117 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 PRB2P02812 416 aaPredicted RBP12.3□□□□□ -0.44
TMEM53-203ENST00000372242 RPL29P47914 159 aaKnown RBP12.3□□□□□ -0.44
TMEM53-203ENST00000372242 B2MP61769 119 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 PATE2Q6UY27 113 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 SCGB1C1Q8TD33 95 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 NARS2Q96I59 477 aaKnown RBP12.3□□□□□ -0.44
TMEM53-203ENST00000372242 UHRF2Q96PU4 802 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 IGKV3-7A0A075B6H7 116 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 A0A1W2PS18 150 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 CXCL2P19875 107 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 PLP1P60201 277 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 CLLU1Q5K131 121 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 KPRPQ5T749 579 aaPredicted RBP12.3□□□□□ -0.44
TMEM53-203ENST00000372242 SLC39A9Q9NUM3 307 aa12.3□□□□□ -0.44
TMEM53-203ENST00000372242 BUB3O43684 328 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 ZNF266Q14584 549 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 LEMD1Q68G75 181 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 RPL7L1Q6DKI1 246 aaKnown RBP12.29□□□□□ -0.44
TMEM53-203ENST00000372242 LCN12Q6JVE5 192 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 Q6ZRG5 221 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 RBPMS2Q6ZRY4 209 aaKnown RBP12.29□□□□□ -0.44
TMEM53-203ENST00000372242 TCF24Q7RTU0 167 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 ZNF709Q8N972 641 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 TMEM37Q8WXS4 190 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 UBQLN2Q9UHD9 624 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 HIGD1AQ9Y241 93 aa12.29□□□□□ -0.44
TMEM53-203ENST00000372242 BMI1P35226 326 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 RPL11P62913 178 aaKnown RBP12.28□□□□□ -0.44
TMEM53-203ENST00000372242 ZNF345Q14585 488 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 GUCA2BQ16661 112 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 GCSAMLQ5JQS6 135 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 KCNRGQ8N5I3 272 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 HSD17B11Q8NBQ5 300 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 PRR25Q96S07 402 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 PARD6GQ9BYG4 376 aaPredicted RBP12.28□□□□□ -0.44
TMEM53-203ENST00000372242 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 TMEM231Q9H6L2 316 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 SLC25A22Q9H936 323 aa12.28□□□□□ -0.44
TMEM53-203ENST00000372242 ZNF785A8K8V0 405 aa12.27□□□□□ -0.44
TMEM53-203ENST00000372242 COX7A2P2O60397 106 aa12.27□□□□□ -0.44
TMEM53-203ENST00000372242 FAM90A2PQ658T7 463 aa12.27□□□□□ -0.44
TMEM53-203ENST00000372242 C16orf54Q6UWD8 224 aa12.27□□□□□ -0.44
TMEM53-203ENST00000372242 OR2K2Q8NGT1 345 aa12.27□□□□□ -0.44
TMEM53-203ENST00000372242 GLMPQ8WWB7 406 aa12.27□□□□□ -0.44
TMEM53-203ENST00000372242 GRAMD2BQ96HH9 432 aa12.27□□□□□ -0.44
TMEM53-203ENST00000372242 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.44
TMEM53-203ENST00000372242 SLC25A39Q9BZJ4 359 aaPredicted RBP12.27□□□□□ -0.44
TMEM53-203ENST00000372242 ZNF256Q9Y2P7 627 aaPredicted RBP12.27□□□□□ -0.44
TMEM53-203ENST00000372242 ZNF98A6NK75 572 aa12.27□□□□□ -0.45
TMEM53-203ENST00000372242 C17orf112F2Z3M2 114 aa12.27□□□□□ -0.45
TMEM53-203ENST00000372242 GP9P14770 177 aa12.27□□□□□ -0.45
TMEM53-203ENST00000372242 GBGT1Q8N5D6 347 aa12.27□□□□□ -0.45
TMEM53-203ENST00000372242 DNAJC4Q9NNZ3 241 aa12.27□□□□□ -0.45
TMEM53-203ENST00000372242 PFDN2Q9UHV9 154 aa12.27□□□□□ -0.45
TMEM53-203ENST00000372242 SORL1Q92673 2214 aa12.26□□□□□ -0.45
TMEM53-203ENST00000372242 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
TMEM53-203ENST00000372242 MORN5Q5VZ52 161 aa12.26□□□□□ -0.45
TMEM53-203ENST00000372242 C10orf113Q5VZT2 155 aa12.26□□□□□ -0.45
TMEM53-203ENST00000372242 LINC00305Q7Z4B0 112 aa12.26□□□□□ -0.45
TMEM53-203ENST00000372242 SHANK2-AS3Q9BTD1 123 aa12.26□□□□□ -0.45
TMEM53-203ENST00000372242 CYTL1Q9NRR1 136 aa12.26□□□□□ -0.45
TMEM53-203ENST00000372242 ELOA3CA0A087WX78 387 aaPredicted RBP12.25□□□□□ -0.45
TMEM53-203ENST00000372242 A0A0D9SG52 128 aa12.25□□□□□ -0.45
TMEM53-203ENST00000372242 H3BRN7 92 aa12.25□□□□□ -0.45
TMEM53-203ENST00000372242 TAAR5O14804 337 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms