RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 NDUFS5O43920 106 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 MYMXA0A1B0GTQ4 84 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 IQCF6A8MYZ5 107 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 ETDBQ3ZM63 59 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 RS1O15537 224 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 TMEM30BQ3MIR4 351 aa12.8□□□□□ -0.36
GTF3C4-201ENST00000372146 PIN1P1O15428 100 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 UTF1Q5T230 341 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 DUSP15Q9H1R2 295 aaPredicted RBP12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 PLXNB3Q9ULL4 1909 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 A0A1W2PPM0 123 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 CRYBA2P53672 197 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 UNQ9370/PRO34162Q6UXP9 181 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 TMEM158Q8WZ71 300 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 COX14Q96I36 57 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 PAPPAQ13219 1627 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 NGFRP08138 427 aa12.79□□□□□ -0.36
GTF3C4-201ENST00000372146 RASL10AQ92737 203 aa12.78□□□□□ -0.36
GTF3C4-201ENST00000372146 PLAC1Q9HBJ0 212 aa12.78□□□□□ -0.36
GTF3C4-201ENST00000372146 IMMP1LQ96LU5 166 aa12.78□□□□□ -0.36
GTF3C4-201ENST00000372146 TCRBV4S1A1TA0A5B7 111 aa12.78□□□□□ -0.36
GTF3C4-201ENST00000372146 IFNL4K9M1U5 179 aa12.78□□□□□ -0.36
GTF3C4-201ENST00000372146 SP9P0CG40 484 aa12.78□□□□□ -0.36
GTF3C4-201ENST00000372146 PSG8Q9UQ74 426 aa12.78□□□□□ -0.36
GTF3C4-201ENST00000372146 IGKV2-40A0A087WW87 121 aaPredicted RBP12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 CXorf51AA0A1B0GTR3 108 aa12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 FAM90A9PA6NNJ1 464 aa12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 IGKV2D-40P01614 121 aaPredicted RBP12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 A0A1W2PPV9 198 aa12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 C6orf226Q5I0X4 101 aa12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 TMEM243Q9BU79 118 aa12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 CRYBA4P53673 196 aa12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 SLAQ13239 276 aa12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 OSR1Q8TAX0 266 aaPredicted RBP12.77□□□□□ -0.36
GTF3C4-201ENST00000372146 TMEM14DPA8MWL7 114 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 SRD5A1P18405 259 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 MPZP25189 248 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 ZNF138P52744 262 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 CCL19Q99731 98 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 CSTL1Q9H114 145 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 H3BMG7 143 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 LINC01465Q8N7H1 131 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 C2CD4DB7Z1M9 353 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 FGF6P10767 208 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 CDKN1BP46527 198 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 SLC25A47Q6Q0C1 308 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 TRGV11A0A075B6L2 103 aa12.77□□□□□ -0.37
GTF3C4-201ENST00000372146 PDLIM4P50479 330 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 RNF125Q96EQ8 232 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 Q6ZS52 159 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 PRIMA1Q86XR5 153 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 CELA3AP09093 270 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 ACP7Q6ZNF0 438 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 A0A1W2PRX2 142 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 IGHG2P01859 326 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 ZC2HC1BQ5TFG8 222 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 VWA8A3KMH1 1905 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 A0A1W2PR77 199 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 K7ERJ3 54 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 TMEM54Q969K7 222 aa12.76□□□□□ -0.37
GTF3C4-201ENST00000372146 IGHV5-10-1A0A0J9YXX1 117 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 WFDC9Q8NEX5 89 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 SHISA9B4DS77 424 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 APOBEC3AP31941 199 aaPredicted RBP12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 MRPL23Q16540 153 aaKnown RBP12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 SIGLEC15Q6ZMC9 328 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 MRPL27Q9P0M9 148 aaKnown RBP12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 DENND4CQ5VZ89 1909 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 IGLV1-36A0A0B4J1U3 117 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 C15orf61A6NNL5 157 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 RPUSD1Q9UJJ7 312 aaKnown RBP12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 MARF1Q9Y4F3 1742 aaKnown RBP12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 TRAV40A0A0B4J280 105 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 CHKB-CPT1BH3BT56 60 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 FOXH1O75593 365 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 EXOC3-AS1Q8N2X6 119 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 WFDC1Q9HC57 220 aa12.75□□□□□ -0.37
GTF3C4-201ENST00000372146 IGHV2-70P01814 119 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 SYNJ2BPP57105 145 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 ANXA2RQ3ZCQ2 193 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 SMKR1H3BMG3 65 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 C1QL2Q7Z5L3 287 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 REPIN1Q9BWE0 567 aaKnown RBP12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 TET2Q6N021 2002 aaPredicted RBP12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 C2orf16Q68DN1 1984 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 C21orf140B9A014 251 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 LYZL1Q6UWQ5 148 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 NBL1P41271 181 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 KLHDC3Q9BQ90 382 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 DEFB124Q8NES8 71 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 FGF11Q92914 225 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 CEND1Q8N111 149 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 TM2D1Q9BX74 207 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 FNDC10F2Z333 226 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 TM4SF5O14894 197 aa12.74□□□□□ -0.37
GTF3C4-201ENST00000372146 BTCP35070 178 aa12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 SLC25A39Q9BZJ4 359 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms