RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 S4R3C0 116 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 MGPP08493 103 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 ARMS2P0C7Q2 107 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 MPV17P39210 176 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 VDAC2P45880 294 aaPredicted RBP9.68□□□□□ -0.86
PTPN1-201ENST00000371621 FXYD2P54710 66 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 CCL7P80098 99 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 CCDC144NLQ6NUI1 221 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 AMN1Q8IY45 258 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 RAXQ9Y2V3 346 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 AHRRA9YTQ3 701 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 TMEM262E9PQX1 116 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 IGKCP01834 107 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 DLX4Q92988 240 aaPredicted RBP9.67□□□□□ -0.86
PTPN1-201ENST00000371621 SPAG8Q99932 426 aaPredicted RBP9.67□□□□□ -0.86
PTPN1-201ENST00000371621 HIGD1AQ9Y241 93 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 C2orf70A6NJV1 201 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 DLL1O00548 723 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 PSPNO60542 156 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 IGHV4-34P06331 123 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 FOXG1P55316 489 aaPredicted RBP9.67□□□□□ -0.86
PTPN1-201ENST00000371621 VMA21Q3ZAQ7 101 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 ZNF784Q8NCA9 323 aaPredicted RBP9.67□□□□□ -0.86
PTPN1-201ENST00000371621 Q9H3A6 140 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 IGKV3D-11A0A0A0MRZ8 115 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 FAM90A27PA6NNH2 459 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 GFRA3O60609 400 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 RSPO1Q2MKA7 263 aaPredicted RBP9.67□□□□□ -0.86
PTPN1-201ENST00000371621 NEU4Q8WWR8 484 aaPredicted RBP9.67□□□□□ -0.86
PTPN1-201ENST00000371621 TMEM54Q969K7 222 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 NABP1Q96AH0 204 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 SCRT2Q9NQ03 307 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 PLXNB3Q9ULL4 1909 aa9.67□□□□□ -0.86
PTPN1-201ENST00000371621 IGHV3OR16-8A0A075B7F1 116 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 NPIPB5A8MRT5 1133 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 DPM2O94777 84 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 KIR2DS2P43631 304 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 ATP5L2Q7Z4Y8 100 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 DTX1Q86Y01 620 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 PRDM14Q9GZV8 571 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 IFI27L2Q9H2X8 130 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 DKK2Q9UBU2 259 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 LY96Q9Y6Y9 160 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 MALRD1Q5VYJ5 2156 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 SAA2-SAA4A0A096LPE2 208 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 CRYGSP22914 178 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 NRN1LQ496H8 165 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 C8orf86Q6ZUL3 223 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 MOGAT3Q86VF5 341 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 EXOC3-AS1Q8N2X6 119 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 PTH2Q96A98 100 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 FOXI3A8MTJ6 420 aaPredicted RBP9.66□□□□□ -0.86
PTPN1-201ENST00000371621 K7ESF4 209 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 SCGB1A1P11684 91 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 TMEM170BQ5T4T1 132 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 RAX2Q96IS3 184 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 TRAV40A0A0B4J280 105 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 OR4C13Q8NGP0 309 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 FER1L6-AS2Q96M78 137 aa9.66□□□□□ -0.86
PTPN1-201ENST00000371621 SMIM27A0A1W2PRY6 76 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 TMEM240Q5SV17 173 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 IGKV3-7A0A075B6H7 116 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 LINC01549A6NIU2 74 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 CLPSP04118 112 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 FAM201AQ5SY85 155 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 RPRMLQ8N4K4 120 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 DUSP23Q9BVJ7 150 aa9.65□□□□□ -0.86
PTPN1-201ENST00000371621 MRPL32Q9BYC8 188 aaKnown RBP9.65□□□□□ -0.86
PTPN1-201ENST00000371621 C9JAW5 83 aa9.65□□□□□ -0.87
PTPN1-201ENST00000371621 SP9P0CG40 484 aa9.65□□□□□ -0.87
PTPN1-201ENST00000371621 CENPVQ7Z7K6 275 aaPredicted RBP9.65□□□□□ -0.87
PTPN1-201ENST00000371621 SLC25A10Q9UBX3 287 aaPredicted RBP9.65□□□□□ -0.87
PTPN1-201ENST00000371621 ZNF815PA8K554 130 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 DUTP33316 252 aaKnown RBP9.64□□□□□ -0.87
PTPN1-201ENST00000371621 MRPL23Q16540 153 aaKnown RBP9.64□□□□□ -0.87
PTPN1-201ENST00000371621 RASL11AQ6T310 242 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 ZNF497Q6ZNH5 498 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 C1QTNF4Q9BXJ3 329 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 LOXL2Q9Y4K0 774 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 RIF1Q5UIP0 2472 aaKnown RBP9.64□□□□□ -0.87
PTPN1-201ENST00000371621 NPIPB6E9PJ23 425 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 MT-ATP8P03928 68 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 RFPL3SP0C7P2 107 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 KLF17Q5JT82 389 aaPredicted RBP9.64□□□□□ -0.87
PTPN1-201ENST00000371621 C10orf55Q5SWW7 151 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 TRAV12-3A0A0B4J271 114 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 ZNF714Q96N38 554 aa9.64□□□□□ -0.87
PTPN1-201ENST00000371621 KLF13Q9Y2Y9 288 aaPredicted RBP9.64□□□□□ -0.87
PTPN1-201ENST00000371621 ZNF146Q15072 292 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 ZNF747Q9BV97 191 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 PKIBQ9C010 78 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 CXXC4Q9H2H0 198 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 THSD7BQ9C0I4 1608 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 C11orf1Q9H5F2 150 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 IGHV3OR16-13A0A075B7E8 117 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 IGHV3-74A0A0B4J1X5 117 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 M0R1B8 84 aa9.63□□□□□ -0.87
PTPN1-201ENST00000371621 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms