RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 POM121L12Q8N7R1 296 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 OR4B1Q8NGF8 309 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 NEU1Q99519 415 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 PKHD1P08F94 4074 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 PSMB3P49720 205 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 FAM78BQ5VT40 261 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 THAP8Q8NA92 274 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 SCGB3A2Q96PL1 93 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 TRGV9Q99603 122 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 SLC25A32Q9H2D1 315 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 RABL2AQ9UBK7 228 aaPredicted RBP9.37□□□□□ -0.91
RPF1-201ENST00000370654 DKK2Q9UBU2 259 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 PAIP2BQ9ULR5 123 aaKnown RBP9.37□□□□□ -0.91
RPF1-201ENST00000370654 RABL2BQ9UNT1 228 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 V9GYH0 126 aa9.37□□□□□ -0.91
RPF1-201ENST00000370654 SNRPGP15A8MWD9 76 aa9.36□□□□□ -0.91
RPF1-201ENST00000370654 PRB4P10163 310 aaPredicted RBP9.36□□□□□ -0.91
RPF1-201ENST00000370654 PPP1R1AQ13522 171 aa9.36□□□□□ -0.91
RPF1-201ENST00000370654 C1orf194Q5T5A4 169 aa9.36□□□□□ -0.91
RPF1-201ENST00000370654 FAM222AQ5U5X8 452 aa9.36□□□□□ -0.91
RPF1-201ENST00000370654 MCFD2Q8NI22 146 aa9.36□□□□□ -0.91
RPF1-201ENST00000370654 NDUFAF3Q9BU61 184 aa9.36□□□□□ -0.91
RPF1-201ENST00000370654 CACFD1Q9UGQ2 172 aa9.36□□□□□ -0.91
RPF1-201ENST00000370654 PKD1P98161 4303 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 A0A0J9YX75 114 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 SPART-AS1P0CW21 52 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 ANXA3P12429 323 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 VAMP1P23763 118 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 ID1P41134 155 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 PAX9P55771 341 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 SRPXP78539 464 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 PSG9Q00887 426 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 TMEM128Q5BJH2 165 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 OR8I2Q8N0Y5 310 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 CENPSQ8N2Z9 138 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 LRTM2Q8N967 370 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 COQ8AQ8NI60 647 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 PPP1R14BQ96C90 147 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 CLUHP3Q96NS8 147 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 BCL7BQ9BQE9 202 aa9.35□□□□□ -0.91
RPF1-201ENST00000370654 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 SMIM9A6NGZ8 99 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 H3BP45 60 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 WRBO00258 174 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 SFT2D2O95562 160 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 HOXB5P09067 269 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 P0DMU3 169 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 FAM231AP0DMU4 169 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 FAM231CP0DMU5 169 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 ATP5IP56385 69 aaPredicted RBP9.34□□□□□ -0.91
RPF1-201ENST00000370654 PYDC2Q56P42 97 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 RSG1Q9BU20 258 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 SLC25A22Q9H936 323 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 YTHDF2Q9Y5A9 579 aaKnown RBP9.34□□□□□ -0.91
RPF1-201ENST00000370654 RFNGQ9Y644 331 aa9.34□□□□□ -0.91
RPF1-201ENST00000370654 DUXBA0A1W2PPF3 345 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 ZNF98A6NK75 572 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 A8MTW9 85 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 ISLRO14498 428 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 HTN3P15516 51 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 NUP62P37198 522 aaPredicted RBP9.33□□□□□ -0.92
RPF1-201ENST00000370654 RAB11AP62491 216 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 GGNBP1Q5YKI7 109 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 LINC00336Q6ZUF6 198 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 RNF182Q8N6D2 247 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 NIPSNAP3BQ9BS92 247 aa9.33□□□□□ -0.92
RPF1-201ENST00000370654 LOC102723971A0A1B0GUV8 181 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 PRSS29PA6NIE9 313 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 CRXO43186 299 aaPredicted RBP9.32□□□□□ -0.92
RPF1-201ENST00000370654 SYNGR2O43760 224 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 ADAP1O75689 374 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 CCNKO75909 580 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 SLC25A6P12236 298 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 ORM2P19652 201 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 SPANXN5Q5MJ07 72 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 EBLN2Q6P2I7 272 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 Q6ZR54 194 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 TOMM5Q8N4H5 51 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 PFDN2Q9UHV9 154 aa9.32□□□□□ -0.92
RPF1-201ENST00000370654 RYR1P21817 5038 aa9.31□□□□□ -0.92
RPF1-201ENST00000370654 TMEM189A5PLL7 270 aa9.31□□□□□ -0.92
RPF1-201ENST00000370654 ZNF705GA8MUZ8 300 aaPredicted RBP9.31□□□□□ -0.92
RPF1-201ENST00000370654 M0R2Z0 102 aa9.31□□□□□ -0.92
RPF1-201ENST00000370654 FABP1P07148 127 aa9.31□□□□□ -0.92
RPF1-201ENST00000370654 C7orf50Q9BRJ6 194 aaKnown RBP9.31□□□□□ -0.92
RPF1-201ENST00000370654 RPRMQ9NS64 109 aa9.31□□□□□ -0.92
RPF1-201ENST00000370654 DOK5Q9P104 306 aa9.31□□□□□ -0.92
RPF1-201ENST00000370654 GOLT1BQ9Y3E0 138 aa9.31□□□□□ -0.92
RPF1-201ENST00000370654 TMED3Q9Y3Q3 217 aa9.31□□□□□ -0.92
RPF1-201ENST00000370654 NACAE9PAV3 2078 aa9.3□□□□□ -0.92
RPF1-201ENST00000370654 PMS2P5A8MQ11 134 aa9.3□□□□□ -0.92
RPF1-201ENST00000370654 HBE1P02100 147 aa9.3□□□□□ -0.92
RPF1-201ENST00000370654 FAUP35544 74 aaKnown RBP9.3□□□□□ -0.92
RPF1-201ENST00000370654 CNN1P51911 297 aaKnown RBP9.3□□□□□ -0.92
RPF1-201ENST00000370654 POLR2GP62487 172 aaKnown RBP eCLIP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms