RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 GNG13Q9P2W3 67 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 CES1P1Q9UKY3 287 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 FAM181BA6NEQ2 426 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 H3BUT2 72 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 P01737 135 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 PTGDSP41222 190 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 KIR2DS2P43631 304 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 DLX1P56177 255 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 TEX36Q5VZQ5 186 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 LINC00482Q8N8I6 264 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 ZFP62Q8NB50 900 aaPredicted RBP4.08□□□□□ -1.76
UBE3D-202ENST00000369746 SCGB1C1Q8TD33 95 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 RNF166Q96A37 237 aaPredicted RBP4.08□□□□□ -1.76
UBE3D-202ENST00000369746 PRR25Q96S07 402 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 SSBP3Q9BWW4 388 aaPredicted RBP4.08□□□□□ -1.76
UBE3D-202ENST00000369746 JPT2Q9H910 190 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 GNB4Q9HAV0 340 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 IL36BQ9NZH7 164 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 PLA2G2DQ9UNK4 145 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 RNF114Q9Y508 228 aa4.08□□□□□ -1.76
UBE3D-202ENST00000369746 OTOGQ6ZRI0 2925 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 RAI1Q7Z5J4 1906 aaPredicted RBP4.07□□□□□ -1.76
UBE3D-202ENST00000369746 CREBBPQ92793 2442 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 CRYM-AS1A6NIL9 109 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 C2orf70A6NJV1 201 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 SCRG1O75711 98 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 OR2H2O95918 312 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 IFITM1P13164 125 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 KRTAP10-9P60411 292 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 SP6Q3SY56 376 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF672Q499Z4 452 aaPredicted RBP4.07□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF645Q8N7E2 425 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF740Q8NDX6 193 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 TSKUQ8WUA8 353 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 GTSF1Q8WW33 167 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 MLST8Q9BVC4 326 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 YTHDF2Q9Y5A9 579 aaKnown RBP4.07□□□□□ -1.76
UBE3D-202ENST00000369746 ICE1Q9Y2F5 2266 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 TRGV8A0A0C4DH27 118 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 FAM72CH0Y354 149 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 FABP6P51161 128 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 ADIGQ0VDE8 80 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 FAM72AQ5TYM5 149 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 Q5XG85 94 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 FAM72DQ6L9T8 149 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 C2orf91Q6ZV80 131 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 MRPL55Q7Z7F7 128 aaKnown RBP4.07□□□□□ -1.76
UBE3D-202ENST00000369746 OOSP2Q86WS3 158 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 FAM72BQ86X60 149 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 LINC01555Q8NAE3 123 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 ZPLD1Q8TCW7 415 aa4.07□□□□□ -1.76
UBE3D-202ENST00000369746 TEP1Q99973 2627 aaKnown RBP4.07□□□□□ -1.76
UBE3D-202ENST00000369746 CEBPZOSA8MTT3 80 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 HMGN4O00479 90 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 ANGPTL7O43827 346 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 SCTP09683 121 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 H2BFMP0C1H6 154 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 SMIM13P0DJ93 91 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 GYPEP15421 78 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 GATA2P23769 480 aaPredicted RBP4.06□□□□□ -1.76
UBE3D-202ENST00000369746 IBA57Q5T440 356 aaKnown RBP4.06□□□□□ -1.76
UBE3D-202ENST00000369746 TEPPQ6URK8 271 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF627Q7L945 461 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 LYPD6Q86Y78 171 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 STPG3Q8N7X2 389 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 OR10J6PQ8NGY7 276 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 SRSF12Q8WXF0 261 aaKnown RBP4.06□□□□□ -1.76
UBE3D-202ENST00000369746 DDB2Q92466 427 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 HIGD1BQ9P298 99 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 CKLFQ9UBR5 152 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 ESPL1Q14674 2120 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 A0A0J9YW62 118 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 A0A1B0GTH9 108 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 MDFIC2A0A1B0GVS7 189 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 GRIFINA4D1Z8 144 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 E9PLD3 99 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 C11orf98E9PRG8 122 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 NPFFO15130 113 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 IGKV1D-16P01601 117 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 IGHV3-7P01780 117 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 VDAC2P45880 294 aaPredicted RBP4.06□□□□□ -1.76
UBE3D-202ENST00000369746 UNC119Q13432 240 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 SLC35E4Q6ICL7 350 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 OR11H6Q8NGC7 330 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 FGFBP3Q8TAT2 258 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 PIFOQ8TCI5 191 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF837Q96EG3 531 aaPredicted RBP4.06□□□□□ -1.76
UBE3D-202ENST00000369746 PDFQ9HBH1 243 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 SLC39A9Q9NUM3 307 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 PRO0461Q9UI25 63 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 OR2W1Q9Y3N9 320 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 TMEM14AQ9Y6G1 99 aa4.06□□□□□ -1.76
UBE3D-202ENST00000369746 DMXL2Q8TDJ6 3036 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 FRYQ5TBA9 3013 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.05□□□□□ -1.76
UBE3D-202ENST00000369746 C5orf49A4QMS7 147 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 NCBP2LA6PVI3 153 aaKnown RBP4.05□□□□□ -1.76
UBE3D-202ENST00000369746 H7C1H1 209 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 C19orf84I3L1E1 186 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 HSPB6O14558 160 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms