RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 UHRF2Q96PU4 802 aa8.4□□□□□ -1.06
BRCC3-204ENST00000369462 UBQLN2Q9UHD9 624 aa8.4□□□□□ -1.06
BRCC3-204ENST00000369462 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 NDUFA4O00483 81 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 EIF3GO75821 320 aaKnown RBP eCLIP8.39□□□□□ -1.07
BRCC3-204ENST00000369462 SULT1A2P50226 295 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 TMEM41BQ5BJD5 291 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 SEPSECSQ9HD40 501 aaKnown RBP8.39□□□□□ -1.07
BRCC3-204ENST00000369462 LINC01619G3V211 115 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 ZNF207O43670 478 aaKnown RBP8.39□□□□□ -1.07
BRCC3-204ENST00000369462 PLP1P60201 277 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 FAM106AQ4KMX7 169 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 FAM78BQ5VT40 261 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 C10orf113Q5VZT2 155 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 GPHB5Q86YW7 130 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 FAM213BQ8TBF2 198 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 GATAD1Q8WUU5 269 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 RAX2Q96IS3 184 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 ELOA3CA0A087WX78 387 aaPredicted RBP8.39□□□□□ -1.07
BRCC3-204ENST00000369462 ZP3P21754 424 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 SLURP1P55000 103 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 SYNJ2BPP57105 145 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 FAM122CQ6P4D5 195 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 OR1L4Q8NGR5 311 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 PCNPQ8WW12 178 aaKnown RBP8.39□□□□□ -1.07
BRCC3-204ENST00000369462 PFDN5Q99471 154 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 CITED1Q99966 193 aa8.39□□□□□ -1.07
BRCC3-204ENST00000369462 MRPL27Q9P0M9 148 aaKnown RBP8.39□□□□□ -1.07
BRCC3-204ENST00000369462 A0A1W2PPV4 95 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 ZNF705EA8MWA4 302 aaPredicted RBP8.38□□□□□ -1.07
BRCC3-204ENST00000369462 CCL24O00175 119 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 RAB5CP51148 216 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 PXDC1Q5TGL8 231 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 LINC00305Q7Z4B0 112 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 SLC25A22Q9H936 323 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 HIGD1AQ9Y241 93 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 HMGB3O15347 200 aaKnown RBP8.38□□□□□ -1.07
BRCC3-204ENST00000369462 MORN5Q5VZ52 161 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 SPATA31B1PQ5VZV4 182 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 ZNF767PQ75MW2 155 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 TMEM190Q8WZ59 177 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 RAB24Q969Q5 203 aa8.38□□□□□ -1.07
BRCC3-204ENST00000369462 RHOBP62745 196 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 RABAC1Q9UI14 185 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 VWFP04275 2813 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 IGHV3OR16-13A0A075B7E8 117 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 IGHV3-49A0A0A0MS15 119 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 IGHV3-74A0A0B4J1X5 117 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 CDC34P49427 236 aaPredicted RBP8.37□□□□□ -1.07
BRCC3-204ENST00000369462 KLF5Q13887 457 aaPredicted RBP8.37□□□□□ -1.07
BRCC3-204ENST00000369462 ZNF726P1Q15940 193 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 LEMD1Q68G75 181 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 SSX7Q7RTT5 188 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 C3orf56Q8N813 242 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 METTL26Q96S19 204 aa8.37□□□□□ -1.07
BRCC3-204ENST00000369462 SLC25A39Q9BZJ4 359 aaPredicted RBP8.37□□□□□ -1.07
BRCC3-204ENST00000369462 ACTR3CQ9C0K3 210 aaPredicted RBP8.37□□□□□ -1.07
BRCC3-204ENST00000369462 NPPCP23582 126 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 FHL3Q13643 280 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 MIR17HGQ75NE6 70 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 DLX4Q92988 240 aaPredicted RBP8.36□□□□□ -1.07
BRCC3-204ENST00000369462 DAZ1Q9NQZ3 744 aaKnown RBP8.36□□□□□ -1.07
BRCC3-204ENST00000369462 FUT9Q9Y231 359 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 TRAV5A0A0B4J249 113 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 SEC14L6B5MCN3 397 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 LCN15Q6UWW0 184 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 DPPA3Q6W0C5 159 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 C12orf54Q6X4T0 127 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 C1QL4Q86Z23 238 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 SFT2D1Q8WV19 159 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 SCRT1Q9BWW7 348 aa8.36□□□□□ -1.07
BRCC3-204ENST00000369462 IGHV3-66A0A0C4DH42 116 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 CTXND1A0A1B0GTU2 59 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 A0A1B0GV50 99 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 RGS13O14921 159 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 APOHP02749 345 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-204ENST00000369462 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 RNF2Q99496 336 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 ZNF98A6NK75 572 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 CRYBB3P26998 211 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 SHANK2-AS3Q9BTD1 123 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 MRPL32Q9BYC8 188 aaKnown RBP8.35□□□□□ -1.07
BRCC3-204ENST00000369462 UFC1Q9Y3C8 167 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 TRRAPQ9Y4A5 3859 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 LGALS9O00182 355 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 NMBP08949 121 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 EDN2P20800 178 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 FGF8P55075 233 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-204ENST00000369462 RAB14P61106 215 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 BLOC1S1P78537 153 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 S100A7AQ86SG5 101 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 LRRC20Q8TCA0 184 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 SAT2Q96F10 170 aaPredicted RBP8.35□□□□□ -1.07
BRCC3-204ENST00000369462 ZNF747Q9BV97 191 aa8.35□□□□□ -1.07
BRCC3-204ENST00000369462 NOTCH3Q9UM47 2321 aa8.34□□□□□ -1.07
BRCC3-204ENST00000369462 TMEM213A2RRL7 107 aa8.34□□□□□ -1.07
BRCC3-204ENST00000369462 MAP1LC3B2A6NCE7 125 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms