RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 WIPF1O43516 503 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 MPDU1O75352 247 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 HYPMO75409 117 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 LCN12Q6JVE5 192 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 Q6ZRG5 221 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 GRAMD2BQ96HH9 432 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 PRR25Q96S07 402 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 TMEM231Q9H6L2 316 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 VSIRQ9H7M9 311 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 SLC39A9Q9NUM3 307 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 HIGD1AQ9Y241 93 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 U3KQE9 123 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 ANK2Q01484 3957 aa10.48□□□□□ -0.73
TPM3-211ENST00000368531 HMSDA8MTL9 139 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 COX7A2P2O60397 106 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 GP9P14770 177 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 CXCL2P19875 107 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 RPL29P47914 159 aaKnown RBP10.47□□□□□ -0.73
TPM3-211ENST00000368531 TFPI2P48307 235 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 B2MP61769 119 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 EGFEM1PQ0D2K5 195 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 LAMTOR1Q6IAA8 161 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 C16orf54Q6UWD8 224 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 GBGT1Q8N5D6 347 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 UHRF2Q96PU4 802 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 SCRT1Q9BWW7 348 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 SLC25A22Q9H936 323 aa10.47□□□□□ -0.73
TPM3-211ENST00000368531 ZNF256Q9Y2P7 627 aaPredicted RBP10.47□□□□□ -0.73
TPM3-211ENST00000368531 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 TRRAPQ9Y4A5 3859 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 ZNF785A8K8V0 405 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 C17orf112F2Z3M2 114 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 BUB3O43684 328 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 PLP1P60201 277 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 PRR20EP86478 221 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 PRR20CP86479 221 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 PRR20DP86480 221 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 PRR20BP86481 221 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 PRR20AP86496 221 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 ZNF266Q14584 549 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 LEMD1Q68G75 181 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 RPL7L1Q6DKI1 246 aaKnown RBP10.46□□□□□ -0.73
TPM3-211ENST00000368531 PATE2Q6UY27 113 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 WFDC3Q8IUB2 231 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 HSD17B11Q8NBQ5 300 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 OR2K2Q8NGT1 345 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 NEURL2Q9BR09 285 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 SLC25A39Q9BZJ4 359 aaPredicted RBP10.46□□□□□ -0.73
TPM3-211ENST00000368531 ARV1Q9H2C2 271 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 PFDN2Q9UHV9 154 aa10.46□□□□□ -0.73
TPM3-211ENST00000368531 BORCS7-ASMTA0A0B4J1R7 106 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 ZNF98A6NK75 572 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 C1QBP02746 253 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 FFAR4Q5NUL3 377 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 KPRPQ5T749 579 aaPredicted RBP10.45□□□□□ -0.74
TPM3-211ENST00000368531 PXDC1Q5TGL8 231 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 C10orf113Q5VZT2 155 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 FAM90A2PQ658T7 463 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 OR8I2Q8N0Y5 310 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 KCNRGQ8N5I3 272 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 GLMPQ8WWB7 406 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 TMEM37Q8WXS4 190 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 DNAJC4Q9NNZ3 241 aa10.45□□□□□ -0.74
TPM3-211ENST00000368531 ZMAT5Q9UDW3 170 aaKnown RBP10.45□□□□□ -0.74
TPM3-211ENST00000368531 TRAV25A0A0B4J276 109 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 A0A0D9SG52 128 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 H3BRN7 92 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 DNASE2O00115 360 aaPredicted RBP10.44□□□□□ -0.74
TPM3-211ENST00000368531 GCSAMLQ5JQS6 135 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 LINC00305Q7Z4B0 112 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 STXBP6Q8NFX7 210 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 OR1L4Q8NGR5 311 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 ARPC5LQ9BPX5 153 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 SHANK2-AS3Q9BTD1 123 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 PARD6GQ9BYG4 376 aaPredicted RBP10.44□□□□□ -0.74
TPM3-211ENST00000368531 KCNIP2Q9NS61 270 aa10.44□□□□□ -0.74
TPM3-211ENST00000368531 AURKAIP1Q9NWT8 199 aaPredicted RBP10.44□□□□□ -0.74
TPM3-211ENST00000368531 ELOA3CA0A087WX78 387 aaPredicted RBP10.43□□□□□ -0.74
TPM3-211ENST00000368531 KANTRA0A1W2PQU2 76 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 TAAR5O14804 337 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 TSPAN4O14817 238 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 PFDN1O60925 122 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 ATP6V0CP27449 155 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 S100A7P31151 101 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 DEFA6Q01524 100 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 ZNF345Q14585 488 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 LGALSLQ3ZCW2 172 aaPredicted RBP10.43□□□□□ -0.74
TPM3-211ENST00000368531 ZFP69Q49AA0 526 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 MORN5Q5VZ52 161 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 SIGLEC15Q6ZMC9 328 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 TMUB2Q71RG4 321 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 HYLS1Q96M11 299 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 PFDN5Q99471 154 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 SLC25A32Q9H2D1 315 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 DNHD1Q96M86 4753 aa10.43□□□□□ -0.74
TPM3-211ENST00000368531 SORL1Q92673 2214 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 TRAV5A0A0B4J249 113 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 HELTA6NFD8 242 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 CD7P09564 240 aa10.42□□□□□ -0.74
TPM3-211ENST00000368531 PAFAH1B2P68402 229 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms