RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SPATA31B1PQ5VZV4 182 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 TRGV9Q99603 122 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 RFNGQ9Y644 331 aa11.44□□□□□ -0.58
CKS1B-202ENST00000368436 TNFSF8P32971 234 aa11.43□□□□□ -0.58
CKS1B-202ENST00000368436 PAX9P55771 341 aa11.43□□□□□ -0.58
CKS1B-202ENST00000368436 THAP8Q8NA92 274 aa11.43□□□□□ -0.58
CKS1B-202ENST00000368436 FAM210BQ96KR6 192 aa11.43□□□□□ -0.58
CKS1B-202ENST00000368436 SLIRPQ9GZT3 109 aaKnown RBP11.43□□□□□ -0.58
CKS1B-202ENST00000368436 IGKV1OR2-108A0A075B7D4 117 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 FABP12A6NFH5 140 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 ISLRO14498 428 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 SLC25A6P12236 298 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 EMP1P54849 157 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 RAB11AP62491 216 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 PSG9Q00887 426 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 OR2F1Q13607 317 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 SAMD13Q5VXD3 122 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 OR8I2Q8N0Y5 310 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 LRTM2Q8N967 370 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 OR4B1Q8NGF8 309 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 COQ8AQ8NI60 647 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 SLC35B3Q9H1N7 401 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 DKK2Q9UBU2 259 aa11.42□□□□□ -0.58
CKS1B-202ENST00000368436 IGHV3OR16-12A0A075B7B8 117 aa11.41□□□□□ -0.58
CKS1B-202ENST00000368436 TEX48A0A1B0GUV7 120 aa11.41□□□□□ -0.58
CKS1B-202ENST00000368436 RTL8CO15255 209 aa11.41□□□□□ -0.58
CKS1B-202ENST00000368436 CFDP00746 253 aaPredicted RBP11.41□□□□□ -0.58
CKS1B-202ENST00000368436 LGALS9BQ3B8N2 356 aa11.41□□□□□ -0.58
CKS1B-202ENST00000368436 TMEM128Q5BJH2 165 aa11.41□□□□□ -0.58
CKS1B-202ENST00000368436 EBLN2Q6P2I7 272 aa11.41□□□□□ -0.58
CKS1B-202ENST00000368436 GSG1LQ6UXU4 331 aa11.41□□□□□ -0.58
CKS1B-202ENST00000368436 C1orf158Q8N1D5 194 aa11.41□□□□□ -0.58
CKS1B-202ENST00000368436 NIPSNAP3BQ9BS92 247 aa11.41□□□□□ -0.58
CKS1B-202ENST00000368436 A0A0J9YX75 114 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 A8MTW9 85 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 PRSS46E5RG02 174 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 F6UB75 175 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 IAPPP10997 89 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 OXA1LQ15070 435 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 FAM222AQ5U5X8 452 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 FAM78BQ5VT40 261 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 PPP1R14BQ96C90 147 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 C17orf77Q96MU5 243 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 SLC45A2Q9UMX9 530 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
CKS1B-202ENST00000368436 PRSS29PA6NIE9 313 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 MED6O75586 246 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 FAUP35544 74 aaKnown RBP11.39□□□□□ -0.59
CKS1B-202ENST00000368436 MEOX2P50222 304 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 GGNBP1Q5YKI7 109 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 TMED4Q7Z7H5 227 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 TRIM63Q969Q1 353 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 C20orf173Q96LM9 149 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 SLC25A32Q9H2D1 315 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 RPRMQ9NS64 109 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
CKS1B-202ENST00000368436 PKD1P98161 4303 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 ZNF98A6NK75 572 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 H3BMQ9 156 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 M0R2N4 97 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 HBE1P02100 147 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 AMTNQ6UX39 209 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 OR4D5Q8NGN0 318 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 MCFD2Q8NI22 146 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 C16orf92Q96LL3 132 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 CIB3Q96Q77 187 aaPredicted RBP11.38□□□□□ -0.59
CKS1B-202ENST00000368436 DOK5Q9P104 306 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 TMED3Q9Y3Q3 217 aa11.38□□□□□ -0.59
CKS1B-202ENST00000368436 LOC102723971A0A1B0GUV8 181 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 SYNGR2O43760 224 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 IFNA21P01568 189 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 VAMP1P23763 118 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 GALR1P47211 349 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 AP3S2P59780 193 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 RPP30P78346 268 aaKnown RBP11.37□□□□□ -0.59
CKS1B-202ENST00000368436 RNF212Q495C1 297 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 Q6ZR54 194 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 SLC25A21Q9BQT8 299 aaPredicted RBP11.37□□□□□ -0.59
CKS1B-202ENST00000368436 C7orf50Q9BRJ6 194 aaKnown RBP11.37□□□□□ -0.59
CKS1B-202ENST00000368436 RSG1Q9BU20 258 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 PAIP2BQ9ULR5 123 aaKnown RBP11.37□□□□□ -0.59
CKS1B-202ENST00000368436 YTHDF2Q9Y5A9 579 aaKnown RBP11.37□□□□□ -0.59
CKS1B-202ENST00000368436 NACAE9PAV3 2078 aa11.37□□□□□ -0.59
CKS1B-202ENST00000368436 PKHD1P08F94 4074 aa11.36□□□□□ -0.59
CKS1B-202ENST00000368436 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
CKS1B-202ENST00000368436 DYNC1H1Q14204 4646 aaKnown RBP11.36□□□□□ -0.59
CKS1B-202ENST00000368436 SFT2D2O95562 160 aa11.36□□□□□ -0.59
CKS1B-202ENST00000368436 RRN3P1Q2M238 152 aa11.36□□□□□ -0.59
CKS1B-202ENST00000368436 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.36□□□□□ -0.59
CKS1B-202ENST00000368436 TMEM182Q6ZP80 229 aaPredicted RBP11.36□□□□□ -0.59
CKS1B-202ENST00000368436 TOMM5Q8N4H5 51 aa11.36□□□□□ -0.59
CKS1B-202ENST00000368436 IGF2BP2-AS1Q96M15 143 aa11.36□□□□□ -0.59
CKS1B-202ENST00000368436 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
CKS1B-202ENST00000368436 SLC25A22Q9H936 323 aa11.36□□□□□ -0.59
CKS1B-202ENST00000368436 WRBO00258 174 aa11.35□□□□□ -0.59
CKS1B-202ENST00000368436 MED14OSP0DP75 135 aa11.35□□□□□ -0.59
CKS1B-202ENST00000368436 GATA2P23769 480 aaPredicted RBP11.35□□□□□ -0.59
CKS1B-202ENST00000368436 PPP1R1AQ13522 171 aa11.35□□□□□ -0.59
CKS1B-202ENST00000368436 UBE2DNLQ8IWF7 75 aa11.35□□□□□ -0.59
CKS1B-202ENST00000368436 BPIFCQ8NFQ6 507 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms