RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TFPI2P48307 235 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 FAM181BA6NEQ2 426 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 USMG5Q96IX5 58 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 C14orf144Q96I85 54 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 CD59P13987 128 aa9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 ATXN7O15265 892 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPA-203ENST00000366766 RHOGP84095 191 aa9.91□□□□□ -0.82
CDC42BPA-203ENST00000366766 KLK15Q9H2R5 256 aa9.91□□□□□ -0.82
CDC42BPA-203ENST00000366766 H3BTX0 84 aa9.91□□□□□ -0.82
CDC42BPA-203ENST00000366766 C1orf194Q5T5A4 169 aa9.91□□□□□ -0.82
CDC42BPA-203ENST00000366766 LINC00469Q8N7U9 141 aa9.91□□□□□ -0.82
CDC42BPA-203ENST00000366766 COL4A6Q14031 1691 aa9.91□□□□□ -0.82
CDC42BPA-203ENST00000366766 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-203ENST00000366766 AMBPP02760 352 aa9.91□□□□□ -0.82
CDC42BPA-203ENST00000366766 H7C2G1 150 aa9.91□□□□□ -0.82
CDC42BPA-203ENST00000366766 CCL3L1P16619 93 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 COQ2Q96H96 371 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 LAGE3Q14657 143 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 PRSS22Q9GZN4 317 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 SPCS1Q9Y6A9 102 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 H0YJW9 148 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 FAM19A2Q8N3H0 131 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 TECTAO75443 2155 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 C9orf139Q6ZV77 190 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 RNF182Q8N6D2 247 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 PSPNO60542 156 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 WNT2P09544 360 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 RPRMLQ8N4K4 120 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 TMEM14BQ9NUH8 114 aa9.9□□□□□ -0.82
CDC42BPA-203ENST00000366766 PAX8Q06710 450 aa9.9□□□□□ -0.83
CDC42BPA-203ENST00000366766 CLEC19AQ6UXS0 136 aa9.9□□□□□ -0.83
CDC42BPA-203ENST00000366766 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.83
CDC42BPA-203ENST00000366766 C7orf69Q9H7B7 122 aa9.9□□□□□ -0.83
CDC42BPA-203ENST00000366766 IFI27L1Q96BM0 104 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 C18orf15Q96N68 181 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 LY6EQ16553 131 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 TMEM155Q4W5P6 130 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 LINC00587B1AMM8 73 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 TMEM105Q8N8V8 129 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 FGFBP3Q8TAT2 258 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 DUX3Q96PT4 197 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 GLRX5Q86SX6 157 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 NDUFB8O95169 186 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 C5orf64Q2M2E5 130 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 TIMM23O14925 209 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 Q8TCH9 128 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 LINC00477Q96M19 166 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 C2CD3Q4AC94 2353 aa9.89□□□□□ -0.83
CDC42BPA-203ENST00000366766 PINLYPA6NC86 204 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 FAM223BA6NKX1 122 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 TCRAP04437 139 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 C10orf91Q5T1B1 145 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 FAM223AQ8IWN6 122 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 TOMM40O96008 361 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 CNTFRP26992 372 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 FAM201AQ5SY85 155 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 EFNA4P52798 201 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 NUDT10Q8NFP7 164 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 MRAP2Q96G30 205 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 NUDT11Q96G61 164 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 IGHV1-3A0A0C4DH29 117 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 C15orf62A8K5M9 175 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 RNASE4P34096 147 aaKnown RBP9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 CFHR2P36980 270 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 TMEM200BQ69YZ2 307 aa9.88□□□□□ -0.83
CDC42BPA-203ENST00000366766 TMEM238C9JI98 176 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 C15orf32Q32M92 178 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 IGKCP01834 107 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 GATA2P23769 480 aaPredicted RBP9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 PYYP10082 97 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 PF4P02776 101 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 PCP4P48539 62 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 TMEM249Q2WGJ8 235 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 A0A1B0GWB2 263 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 PSG1P11464 419 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 SPANXA1Q9NS26 97 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 ZNHIT1O43257 154 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 Q0VG73 95 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 CD177Q8N6Q3 437 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 RFNGQ9Y644 331 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 ZNF585BQ52M93 769 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 VMO1Q7Z5L0 202 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 CXCL1P09341 107 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 ZNF138P52744 262 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 Q6ZS92 163 aa9.87□□□□□ -0.83
CDC42BPA-203ENST00000366766 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 RBMY1A1P0DJD3 496 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 RBMY1CP0DJD4 496 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 SEPSECSQ9HD40 501 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 GNG5P63218 68 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 ORAOV1Q8WV07 137 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 RNF224P0DH78 156 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 GATA3P23771 443 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 VDAC2P45880 294 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 TRAV41A0A0B4J266 112 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 CD7P09564 240 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 SPACA3Q8IXA5 215 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms