RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PPP1R14BQ96C90 147 aa14.91□□□□□ -0.02
CD47-202ENST00000361309 NAA50Q9GZZ1 169 aaKnown RBP14.91□□□□□ -0.02
CD47-202ENST00000361309 MAGT1Q9H0U3 335 aa14.91□□□□□ -0.02
CD47-202ENST00000361309 HSPB7Q9UBY9 170 aa14.91□□□□□ -0.02
CD47-202ENST00000361309 TMED3Q9Y3Q3 217 aa14.91□□□□□ -0.02
CD47-202ENST00000361309 GPX4P36969 197 aaPredicted RBP14.9□□□□□ -0.02
CD47-202ENST00000361309 TNP2Q05952 138 aa14.9□□□□□ -0.02
CD47-202ENST00000361309 OR2F1Q13607 317 aa14.9□□□□□ -0.02
CD47-202ENST00000361309 OR8I2Q8N0Y5 310 aa14.9□□□□□ -0.02
CD47-202ENST00000361309 C15orf53Q8NAA6 179 aa14.9□□□□□ -0.02
CD47-202ENST00000361309 OR4C16Q8NGL9 310 aa14.9□□□□□ -0.02
CD47-202ENST00000361309 SLC35E1Q96K37 410 aa14.9□□□□□ -0.02
CD47-202ENST00000361309 C20orf173Q96LM9 149 aa14.9□□□□□ -0.02
CD47-202ENST00000361309 MIXL1Q9H2W2 232 aa14.9□□□□□ -0.02
CD47-202ENST00000361309 LRP1BQ9NZR2 4599 aa14.9□□□□□ -0.02
CD47-202ENST00000361309 SNRPGP15A8MWD9 76 aa14.89□□□□□ -0.03
CD47-202ENST00000361309 CCR6P51684 374 aa14.89□□□□□ -0.03
CD47-202ENST00000361309 SMCO1Q147U7 214 aa14.89□□□□□ -0.03
CD47-202ENST00000361309 CTF1Q16619 201 aa14.89□□□□□ -0.03
CD47-202ENST00000361309 RPRMQ9NS64 109 aa14.89□□□□□ -0.03
CD47-202ENST00000361309 DOK5Q9P104 306 aa14.89□□□□□ -0.03
CD47-202ENST00000361309 KCNIP3Q9Y2W7 256 aa14.89□□□□□ -0.03
CD47-202ENST00000361309 C16orf90A8MZG2 172 aa14.88□□□□□ -0.03
CD47-202ENST00000361309 FABP1P07148 127 aa14.88□□□□□ -0.03
CD47-202ENST00000361309 AKAIN1P0CW23 69 aa14.88□□□□□ -0.03
CD47-202ENST00000361309 FAM3BP58499 235 aaPredicted RBP14.88□□□□□ -0.03
CD47-202ENST00000361309 LYZL2Q7Z4W2 148 aa14.88□□□□□ -0.03
CD47-202ENST00000361309 C16orf92Q96LL3 132 aa14.88□□□□□ -0.03
CD47-202ENST00000361309 ATG101Q9BSB4 218 aa14.88□□□□□ -0.03
CD47-202ENST00000361309 TMEM208Q9BTX3 173 aa14.88□□□□□ -0.03
CD47-202ENST00000361309 PRM2P04554 102 aa14.87□□□□□ -0.03
CD47-202ENST00000361309 MRPS10P82664 201 aaKnown RBP14.87□□□□□ -0.03
CD47-202ENST00000361309 AMTNQ6UX39 209 aa14.87□□□□□ -0.03
CD47-202ENST00000361309 OR51S1Q8NGJ8 323 aa14.87□□□□□ -0.03
CD47-202ENST00000361309 IGF2BP2-AS1Q96M15 143 aa14.87□□□□□ -0.03
CD47-202ENST00000361309 A0A0B4J2A0 478 aa14.86□□□□□ -0.03
CD47-202ENST00000361309 A8MTW9 85 aa14.86□□□□□ -0.03
CD47-202ENST00000361309 RGS5O15539 181 aa14.86□□□□□ -0.03
CD47-202ENST00000361309 MEOX2P50222 304 aa14.86□□□□□ -0.03
CD47-202ENST00000361309 ATP5IP56385 69 aaPredicted RBP14.86□□□□□ -0.03
CD47-202ENST00000361309 SAMD13Q5VXD3 122 aa14.86□□□□□ -0.03
CD47-202ENST00000361309 SMIM4Q8WVI0 70 aa14.86□□□□□ -0.03
CD47-202ENST00000361309 TRGV9Q99603 122 aa14.86□□□□□ -0.03
CD47-202ENST00000361309 PRRT1Q99946 306 aa14.86□□□□□ -0.03
CD47-202ENST00000361309 SHPKQ9UHJ6 478 aa14.86□□□□□ -0.03
CD47-202ENST00000361309 ZNF705GA8MUZ8 300 aaPredicted RBP14.85□□□□□ -0.03
CD47-202ENST00000361309 CLVS1Q8IUQ0 354 aaPredicted RBP14.85□□□□□ -0.03
CD47-202ENST00000361309 SLC25A32Q9H2D1 315 aa14.85□□□□□ -0.03
CD47-202ENST00000361309 IGKV1OR2-108A0A075B7D4 117 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 NBDYA0A0U1RRE5 68 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 LYRM9A8MSI8 78 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 CTDSP2O14595 271 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 CDK2AP2O75956 126 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 GALR1P47211 349 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 ALDH3B2P48448 385 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 OR1S1Q8NH92 325 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 C17orf77Q96MU5 243 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 RSG1Q9BU20 258 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 SLC25A22Q9H936 323 aa14.84□□□□□ -0.03
CD47-202ENST00000361309 AKR1C4P17516 323 aa14.83□□□□□ -0.04
CD47-202ENST00000361309 SPINK13Q1W4C9 94 aa14.83□□□□□ -0.04
CD47-202ENST00000361309 C6orf223Q8N319 242 aa14.83□□□□□ -0.04
CD47-202ENST00000361309 MAPKAPK5-AS1Q8N8E1 139 aa14.83□□□□□ -0.04
CD47-202ENST00000361309 ZNRF2Q8NHG8 242 aa14.83□□□□□ -0.04
CD47-202ENST00000361309 M0R2Z0 102 aa14.82□□□□□ -0.04
CD47-202ENST00000361309 CRXO43186 299 aaPredicted RBP14.82□□□□□ -0.04
CD47-202ENST00000361309 NUDT3O95989 172 aa14.82□□□□□ -0.04
CD47-202ENST00000361309 DEFB130BP0DP73 79 aa14.82□□□□□ -0.04
CD47-202ENST00000361309 DEFB130AP0DP74 79 aa14.82□□□□□ -0.04
CD47-202ENST00000361309 CNN1P51911 297 aaKnown RBP14.82□□□□□ -0.04
CD47-202ENST00000361309 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.82□□□□□ -0.04
CD47-202ENST00000361309 THAP8Q8NA92 274 aa14.82□□□□□ -0.04
CD47-202ENST00000361309 OR11H7Q8NGC8 314 aa14.82□□□□□ -0.04
CD47-202ENST00000361309 PAIP2BQ9ULR5 123 aaKnown RBP14.82□□□□□ -0.04
CD47-202ENST00000361309 ZNF98A6NK75 572 aa14.81□□□□□ -0.04
CD47-202ENST00000361309 F5H768 121 aa14.81□□□□□ -0.04
CD47-202ENST00000361309 CTDSPLO15194 276 aa14.81□□□□□ -0.04
CD47-202ENST00000361309 INSP01308 110 aa14.81□□□□□ -0.04
CD47-202ENST00000361309 IAPPP10997 89 aa14.81□□□□□ -0.04
CD47-202ENST00000361309 RAB11AP62491 216 aa14.81□□□□□ -0.04
CD47-202ENST00000361309 FCN2Q15485 313 aa14.81□□□□□ -0.04
CD47-202ENST00000361309 SCGB3A2Q96PL1 93 aa14.81□□□□□ -0.04
CD47-202ENST00000361309 SCP2D1Q9UJQ7 156 aa14.81□□□□□ -0.04
CD47-202ENST00000361309 ANKRD20A5PA0PJZ0 165 aa14.8□□□□□ -0.04
CD47-202ENST00000361309 DUSP14O95147 198 aaKnown RBP14.8□□□□□ -0.04
CD47-202ENST00000361309 IL18Q14116 193 aa14.8□□□□□ -0.04
CD47-202ENST00000361309 GGNBP1Q5YKI7 109 aa14.8□□□□□ -0.04
CD47-202ENST00000361309 IGFL4Q6B9Z1 124 aa14.8□□□□□ -0.04
CD47-202ENST00000361309 SLC45A2Q9UMX9 530 aa14.8□□□□□ -0.04
CD47-202ENST00000361309 APOBP04114 4563 aaKnown RBP14.8□□□□□ -0.04
CD47-202ENST00000361309 CFDP00746 253 aaPredicted RBP14.79□□□□□ -0.04
CD47-202ENST00000361309 ANXA3P12429 323 aa14.79□□□□□ -0.04
CD47-202ENST00000361309 AZU1P20160 251 aa14.79□□□□□ -0.04
CD47-202ENST00000361309 TSPOP30536 169 aa14.79□□□□□ -0.04
CD47-202ENST00000361309 SRPXP78539 464 aa14.79□□□□□ -0.04
CD47-202ENST00000361309 BAP18Q8IXM2 172 aa14.79□□□□□ -0.04
CD47-202ENST00000361309 OR1B1Q8NGR6 318 aa14.79□□□□□ -0.04
CD47-202ENST00000361309 DIRAS2Q96HU8 199 aa14.79□□□□□ -0.04
CD47-202ENST00000361309 TRAV8-2A0A0B4J237 113 aa14.78□□□□□ -0.04
CD47-202ENST00000361309 PLAC8L1A1L4L8 177 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms