RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 LEPROTL1O95214 131 aa14.16□□□□□ -0.14
RTN4-204ENST00000357732 CRYGBP07316 175 aa14.16□□□□□ -0.14
RTN4-204ENST00000357732 LOXP28300 417 aaPredicted RBP14.16□□□□□ -0.14
RTN4-204ENST00000357732 C16orf54Q6UWD8 224 aa14.16□□□□□ -0.14
RTN4-204ENST00000357732 Q86TA4 180 aa14.16□□□□□ -0.14
RTN4-204ENST00000357732 HIGD1AQ9Y241 93 aa14.16□□□□□ -0.14
RTN4-204ENST00000357732 OTOGLQ3ZCN5 2332 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 IGHV3-48P01763 117 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 IGHV1-8P0DP01 117 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 HOXB4P17483 251 aaPredicted RBP14.15□□□□□ -0.14
RTN4-204ENST00000357732 PET117Q6UWS5 81 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 LINC00322Q6ZN03 302 aaPredicted RBP14.15□□□□□ -0.14
RTN4-204ENST00000357732 ICE1Q9Y2F5 2266 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 A0A1B0GW15 77 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 CHEK1O14757 476 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 ASPHD1Q5U4P2 390 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 LEMD1Q68G75 181 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 GATD1Q8NB37 220 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 TPSG1Q9NRR2 321 aa14.15□□□□□ -0.14
RTN4-204ENST00000357732 F11RQ9Y624 299 aaKnown RBP14.15□□□□□ -0.14
RTN4-204ENST00000357732 PGLYRP4Q96LB8 373 aa14.14□□□□□ -0.15
RTN4-204ENST00000357732 SRSF8Q9BRL6 282 aaKnown RBP14.14□□□□□ -0.15
RTN4-204ENST00000357732 TMEM133Q9H2Q1 129 aa14.14□□□□□ -0.15
RTN4-204ENST00000357732 HSBP1L1C9JCN9 74 aa14.14□□□□□ -0.15
RTN4-204ENST00000357732 HLA-DRB1P01911 266 aa14.14□□□□□ -0.15
RTN4-204ENST00000357732 COL8A1P27658 744 aa14.14□□□□□ -0.15
RTN4-204ENST00000357732 HCP5Q6MZN7 132 aa14.14□□□□□ -0.15
RTN4-204ENST00000357732 MS4A6AQ9H2W1 248 aa14.14□□□□□ -0.15
RTN4-204ENST00000357732 HSPB8Q9UJY1 196 aa14.14□□□□□ -0.15
RTN4-204ENST00000357732 MAP1LC3CQ9BXW4 147 aa14.13□□□□□ -0.15
RTN4-204ENST00000357732 CLEC5AQ9NY25 188 aa14.13□□□□□ -0.15
RTN4-204ENST00000357732 RPH3ALQ9UNE2 315 aa14.13□□□□□ -0.15
RTN4-204ENST00000357732 SIGLEC9Q9Y336 463 aa14.13□□□□□ -0.15
RTN4-204ENST00000357732 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.12□□□□□ -0.15
RTN4-204ENST00000357732 CCL25O15444 150 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 APOHP02749 345 aaPredicted RBP14.12□□□□□ -0.15
RTN4-204ENST00000357732 FAM87AP0C7U9 286 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 RBPJQ06330 500 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 K7EP13 123 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 Q6AWC8 147 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 SPATA12Q7Z6I5 190 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 KIR3DL3Q8N743 410 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 CCL17Q92583 94 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 CTSZQ9UBR2 303 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 ZNF835Q9Y2P0 537 aa14.12□□□□□ -0.15
RTN4-204ENST00000357732 ENSAO43768 121 aaKnown RBP14.11□□□□□ -0.15
RTN4-204ENST00000357732 UNQ5815/PRO19632Q6UWF5 114 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 LYPD2Q6UXB3 125 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 LYPD1Q8N2G4 141 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 RNF5Q99942 180 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 MGAQ8IWI9 3026 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 IGLC1P0CG04 106 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 SLC25A34Q6PIV7 304 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 TMEM75Q8N9X5 138 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 RITA1Q96K30 269 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 SGK494Q96LW2 274 aa14.11□□□□□ -0.15
RTN4-204ENST00000357732 PLCE1Q9P212 2302 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 IGHV2-70DA0A0C4DH43 119 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 RPS20P60866 119 aaKnown RBP14.1□□□□□ -0.15
RTN4-204ENST00000357732 BSPH1Q075Z2 132 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 C12orf54Q6X4T0 127 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 PPP1R27Q86WC6 154 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 WFDC8Q8IUA0 241 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 SLC25A39Q9BZJ4 359 aaPredicted RBP14.1□□□□□ -0.15
RTN4-204ENST00000357732 K7EQM0 130 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 IGLV2-11P01706 119 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 RIGQ13278 110 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 RUSC1-AS1Q66K80 236 aa14.1□□□□□ -0.15
RTN4-204ENST00000357732 TEX22C9J3V5 150 aa14.09□□□□□ -0.15
RTN4-204ENST00000357732 IGLV1-47P01700 117 aa14.09□□□□□ -0.15
RTN4-204ENST00000357732 RBP4P02753 201 aa14.09□□□□□ -0.15
RTN4-204ENST00000357732 PSG1P11464 419 aa14.09□□□□□ -0.15
RTN4-204ENST00000357732 RNASE6Q93091 150 aaKnown RBP14.09□□□□□ -0.15
RTN4-204ENST00000357732 SCNM1Q9BWG6 230 aa14.09□□□□□ -0.15
RTN4-204ENST00000357732 CNOT1A5YKK6 2376 aaKnown RBP14.09□□□□□ -0.15
RTN4-204ENST00000357732 NAV3Q8IVL0 2385 aa14.09□□□□□ -0.15
RTN4-204ENST00000357732 A0A1B0GUT8 65 aa14.09□□□□□ -0.15
RTN4-204ENST00000357732 FBLN7Q53RD9 439 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 RASL11BQ9BPW5 248 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 TTC28Q96AY4 2481 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 TRAV30A0A087WSZ9 112 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 LYZP61626 148 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 S100A7AQ86SG5 101 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 PMCHL2Q9BQD1 86 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 GSX1Q9H4S2 264 aaPredicted RBP14.08□□□□□ -0.16
RTN4-204ENST00000357732 SCRT2Q9NQ03 307 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 JKAMPQ9P055 326 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 INSIG2Q9Y5U4 225 aa14.08□□□□□ -0.16
RTN4-204ENST00000357732 A0A0G2JNJ9 132 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 SH2D7A6NKC9 451 aaPredicted RBP14.07□□□□□ -0.16
RTN4-204ENST00000357732 I3L2K1 104 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 PRRG2O14669 202 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 THBDP07204 575 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 HTR1DP28221 377 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 BPIFA4PQ86YQ2 179 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 Q9UFV3 132 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 IGHV1-3A0A0C4DH29 117 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 LINC01545Q5VT33 79 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 GOLT1AQ6ZVE7 132 aa14.07□□□□□ -0.16
RTN4-204ENST00000357732 NGBQ9NPG2 151 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms