RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 NDUFAF3Q9BU61 184 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 EMC3Q9P0I2 261 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 INSIG2Q9Y5U4 225 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 PRRG2O14669 202 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 NDUFA7O95182 113 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 SCAND1P57086 179 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 PROK1P58294 105 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 TRAT1Q6PIZ9 186 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 TMEM219Q86XT9 240 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 OR10A7Q8NGE5 316 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 CACNG8Q8WXS5 425 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 SLC25A2Q9BXI2 301 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 DKK2Q9UBU2 259 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 SNURFLB1AK76 121 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 J3KRW8 73 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 TNFRSF13BO14836 293 aaPredicted RBP4.3□□□□□ -1.72
CD47-201ENST00000355354 CD5LO43866 347 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 TMEM14BQ9NUH8 114 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 TMED3Q9Y3Q3 217 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 HILPDAQ9Y5L2 63 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 TEX50A0A1B0GTY4 177 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 E7EQL1 145 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 IGLV1-44P01699 117 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 SMIM6P0DI80 62 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 MEF2CQ06413 473 aaPredicted RBP4.3□□□□□ -1.72
CD47-201ENST00000355354 IL24Q13007 206 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 MRPL21Q7Z2W9 205 aaKnown RBP4.3□□□□□ -1.72
CD47-201ENST00000355354 GAFA1Q96PS6 74 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 FBXL15Q9H469 300 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 OBP2BQ9NPH6 170 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 SLC45A2Q9UMX9 530 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 VSTM5A8MXK1 200 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 KLRC4-KLRK1H3BQV0 150 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 FGF6P10767 208 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 KIAA1109Q2LD37 5005 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 FBLL1A6NHQ2 334 aaKnown RBP4.29□□□□□ -1.72
CD47-201ENST00000355354 HLA-DRB1P01911 266 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 SERPINE2P07093 398 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 PSG5Q15238 335 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 CLUHP3Q96NS8 147 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 NIPSNAP3BQ9BS92 247 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 NPIPB11E5RHQ5 1161 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 ERCC8Q13216 396 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 Q56UQ5 140 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 AMN1Q8IY45 258 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 SFRP2Q96HF1 295 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 TEX22C9J3V5 150 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 ZNF324O75467 553 aaPredicted RBP4.29□□□□□ -1.72
CD47-201ENST00000355354 VENTXO95231 258 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 S100GP29377 79 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 FAUP35544 74 aaKnown RBP4.29□□□□□ -1.72
CD47-201ENST00000355354 BLCAPP62952 87 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 GRB2P62993 217 aaKnown RBP4.29□□□□□ -1.72
CD47-201ENST00000355354 GNG3P63215 75 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 UQCC3Q6UW78 93 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 TOMM20LQ6UXN7 152 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 ZNF257Q9Y2Q1 563 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 MPC1Q9Y5U8 109 aa4.29□□□□□ -1.72
CD47-201ENST00000355354 SMCO3A2RU48 225 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 HIGD1CA8MV81 97 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 TP53I11O14683 189 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 MRPS12O15235 138 aaKnown RBP4.28□□□□□ -1.72
CD47-201ENST00000355354 TCAPO15273 167 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 IGHG2P01859 326 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 SLC25A6P12236 298 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 SSX8Q7RTT4 187 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 MMD2Q8IY49 270 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 KCNS1Q96KK3 526 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 NABP2Q9BQ15 211 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 CDC42EP3Q9UKI2 254 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 TRGV5A0A0B4J1U4 118 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 PPP1R2P9O14990 202 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 IGHV4-39P01824 125 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 S100A6P06703 90 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 PSG1P11464 419 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 PRTN3P24158 256 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 EFNA4P52798 201 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 KRTAP24-1Q3LI83 254 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 S100A7AQ86SG5 101 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 NUDT10Q8NFP7 164 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 NUDT11Q96G61 164 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 TRGV8A0A0C4DH27 118 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 NPIPB5A8MRT5 1133 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 RNF223E7ERA6 249 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 TAX1BP3O14907 124 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 TCF21O43680 179 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 ORM2P19652 201 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 NMUP48645 174 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 PAX2Q02962 417 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 BSPH1Q075Z2 132 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 REC114Q7Z4M0 266 aa4.28□□□□□ -1.72
CD47-201ENST00000355354 RBM7Q9Y580 266 aaKnown RBP4.28□□□□□ -1.72
CD47-201ENST00000355354 WIPF1O43516 503 aa4.28□□□□□ -1.73
CD47-201ENST00000355354 EVI2AP22794 236 aa4.28□□□□□ -1.73
CD47-201ENST00000355354 OR2D3Q8NGH3 330 aa4.28□□□□□ -1.73
CD47-201ENST00000355354 PIFOQ8TCI5 191 aa4.28□□□□□ -1.73
CD47-201ENST00000355354 S100A13Q99584 98 aa4.28□□□□□ -1.73
CD47-201ENST00000355354 MRPL18Q9H0U6 180 aaKnown RBP4.28□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms