RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 FSTP19883 344 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 FUT3P21217 361 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 HNRNPA3P51991 378 aaKnown RBP8.55□□□□□ -1.04
RTN3-204ENST00000354497 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
RTN3-204ENST00000354497 Q499Y3 187 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 HOGA1Q86XE5 327 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 SAXO1Q8IYX7 474 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 OR10H4Q8NGA5 316 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 ANAPC16Q96DE5 110 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 FBXL17Q9UF56 701 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 HECTD4Q9Y4D8 3996 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 IGHV7-81A0A0B4J1V7 117 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 IGLC7A0M8Q6 106 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 FAM90A10PA6NDY2 464 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 H0Y980 276 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 BRI3O95415 125 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 FCGR2CP31995 323 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 RND3P61587 244 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 ICAM4Q14773 271 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 SPSB3Q6PJ21 355 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 RPP25LQ8N5L8 163 aaKnown RBP8.54□□□□□ -1.04
RTN3-204ENST00000354497 LINC00311Q8N616 119 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 STXBP6Q8NFX7 210 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 OR10V1Q8NGI7 309 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 OR51G1Q8NGK1 321 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 OR10AC1Q8NH08 325 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 ABHD14AQ9BUJ0 271 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 ST6GALNAC5Q9BVH7 336 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 BANF2Q9H503 90 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 PLEKHA3Q9HB20 300 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 TPSG1Q9NRR2 321 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 SPANXA1Q9NS26 97 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 ANAPC10Q9UM13 185 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 FOXA2Q9Y261 457 aaPredicted RBP8.54□□□□□ -1.04
RTN3-204ENST00000354497 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 TRAV8-7A0A075B6U6 113 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 E5RGE8 158 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 SLC17A2O00624 439 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 DEDDO75618 318 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 GNB3P16520 340 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 PIGYQ3MUY2 71 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 TP53I3Q53FA7 332 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 SFRP2Q96HF1 295 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 OR10C1Q96KK4 312 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 NSG2Q9Y328 171 aa8.54□□□□□ -1.04
RTN3-204ENST00000354497 TRAV9-1A0A075B6T8 112 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 TRAV18A0A075B6X5 111 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 TMEM30CPA0ZSE6 113 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 GAGE12BA1L429 117 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 NBR2O15453 112 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 MT-CO2P00403 227 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 HLA-DRB1P01911 266 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 CRYBA4P53673 196 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 BAXQ07812 192 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 SLC25A48Q6ZT89 311 aaKnown RBP8.53□□□□□ -1.04
RTN3-204ENST00000354497 NEGR1Q7Z3B1 354 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 RITA1Q96K30 269 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 ZNF586Q9NXT0 402 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 GNG12Q9UBI6 72 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 GPR132Q9UNW8 380 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 URGCP-MRPS24S4R325 110 aa8.53□□□□□ -1.04
RTN3-204ENST00000354497 LOC102723971A0A1B0GUV8 181 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 C15orf65H3BRN8 121 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 H7BYZ3 331 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 HYPMO75409 117 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 HRASP01112 189 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 STAG3L2P0CL84 134 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 RAB32Q13637 225 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 IL13RA2Q14627 380 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 PLGLAQ15195 96 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 VAMP3Q15836 100 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 BATFQ16520 125 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 TDRG1Q3Y452 100 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 FAM90A2PQ658T7 463 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 LCN12Q6JVE5 192 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 TMEM217Q8N7C4 229 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 C8orf31Q8N9H6 132 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 GATAD1Q8WUU5 269 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 GPER1Q99527 375 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 SIGMAR1Q99720 223 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 ZNF581Q9P0T4 197 aa8.52□□□□□ -1.05
RTN3-204ENST00000354497 SAA2-SAA4A0A096LPE2 208 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 ZNF320A2RRD8 509 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 TMEM189A5PLL7 270 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 CNIH1O95406 144 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 TSPOP30536 169 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 YPEL3P61236 119 aaPredicted RBP8.51□□□□□ -1.05
RTN3-204ENST00000354497 SUMO1P63165 101 aaKnown RBP8.51□□□□□ -1.05
RTN3-204ENST00000354497 NDPQ00604 133 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 KISS1Q15726 138 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 PMCHL1Q16048 86 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 MRPL54Q6P161 138 aaKnown RBP8.51□□□□□ -1.05
RTN3-204ENST00000354497 CYP2G1PQ6ZSU1 146 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 DEFB125Q8N687 156 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 FER1L6-AS1Q8NA97 138 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 OR51A4Q8NGJ6 313 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 GNPNAT1Q96EK6 184 aaPredicted RBP8.51□□□□□ -1.05
RTN3-204ENST00000354497 ZNF355PQ9NSJ1 428 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 DHDHQ9UQ10 334 aa8.51□□□□□ -1.05
RTN3-204ENST00000354497 C13orf42A0A1B0GVH6 325 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms